RNA–Protein interactions for RNA: ENST00000577543.5

TGIF1-222, Transcript of TGFB induced factor homeobox 1, human

TSL 3 BASIC

Gene TGIF1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-222	ENST00000577543	CATSPER3	Q86XQ3	398 aa		21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	PRPF31	Q8WWY3	499 aa	Known RBP	21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	POLR3C	Q9BUI4	534 aa	Predicted RBP	21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	RAB34	Q9BZG1	259 aa		21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	INO80B	Q9C086	356 aa	Predicted RBP	21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	XPNPEP1	Q9NQW7	623 aa		21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	TMEM161A	Q9NX61	479 aa		21.45	■■□□□ 1.02
TGIF1-222	ENST00000577543	USO1	O60763	962 aa	Known RBP	21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	LINC00271	P0C7V0	271 aa		21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	RPA1	P27694	616 aa		21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	LAMTOR4	Q0VGL1	99 aa		21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	FERMT3	Q86UX7	667 aa		21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	CLP1	Q92989	425 aa	Known RBP	21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	DACT1	Q9NYF0	836 aa		21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	MRPL42	Q9Y6G3	142 aa	Known RBP	21.44	■■□□□ 1.02
TGIF1-222	ENST00000577543	SRGAP2C	P0DJJ0	459 aa		21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	CATSPER4	Q7RTX7	472 aa		21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	RNF149	Q8NC42	400 aa		21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	C11orf84	Q9BUA3	381 aa	Predicted RBP	21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	ELAC1	Q9H777	363 aa	Known RBP	21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	IFT122	Q9HBG6	1241 aa		21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	LMCD1	Q9NZU5	365 aa		21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	LRWD1	Q9UFC0	647 aa		21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543	PIN4	Q9Y237	131 aa	Known RBP	21.43	■■□□□ 1.02
TGIF1-222	ENST00000577543		A0A087WWV3	80 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	VPS37C	A5D8V6	355 aa	Predicted RBP	21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543		H3BNC9	293 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	CCT6A	P40227	531 aa	Known RBP	21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	PRPH	P41219	470 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	GPM6B	Q13491	265 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	MXD4	Q14582	209 aa	Predicted RBP	21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	SKIV2L	Q15477	1246 aa	Known RBP	21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	IGSF22	Q8N9C0	903 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	TTC28	Q96AY4	2481 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	NACC1	Q96RE7	527 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	PRDM6	Q9NQX0	595 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	THEG	Q9P2T0	379 aa		21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	DBR1	Q9UK59	544 aa	Known RBP	21.42	■■□□□ 1.02
TGIF1-222	ENST00000577543	TBKBP1	A7MCY6	615 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	C5orf67	F2Z3F1	127 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543		K7ELQ4	463 aa	Predicted RBP	21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	HOXA2	O43364	376 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	FGFR1	P11362	822 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	XRCC6	P12956	609 aa	Known RBP eCLIP	21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	PDC	P20941	246 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	PHKA2	P46019	1235 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	FAM189B	P81408	668 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	PTPRO	Q16827	1216 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	FAM102B	Q5T8I3	360 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	TWF2	Q6IBS0	349 aa	Known RBP	21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	SRGAP1	Q7Z6B7	1085 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	ECHDC2	Q86YB7	292 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	RNF169	Q8NCN4	708 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	SNX29	Q8TEQ0	813 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	CHST12	Q9NRB3	414 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	AGPAT5	Q9NUQ2	364 aa		21.41	■■□□□ 1.02
TGIF1-222	ENST00000577543	MUC3A	Q02505	3323 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	TDRD15	B5MCY1	1934 aa	Known RBP	21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	ASAP2	O43150	1006 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	MUT	P22033	750 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	BMPR1A	P36894	532 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	ATP2C1	P98194	919 aa	Predicted RBP	21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	TFDP1	Q14186	410 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	DTHD1	Q6ZMT9	781 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	BRAP	Q7Z569	592 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	ABI1	Q8IZP0	508 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	MCPH1	Q8NEM0	835 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	ASAP3	Q8TDY4	903 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	MRPL38	Q96DV4	380 aa	Known RBP	21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	PLVAP	Q9BX97	442 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	POLR3F	Q9H1D9	316 aa	Predicted RBP	21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	MINDY3	Q9H8M7	445 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	STK24	Q9Y6E0	443 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543	NCOR1	O75376	2440 aa		21.4	■■□□□ 1.02
TGIF1-222	ENST00000577543		A0A0U1RQF3	1178 aa		21.39	■■□□□ 1.01
TGIF1-222	ENST00000577543	ARHGEF35	A5YM69	484 aa		21.39	■■□□□ 1.01
TGIF1-222	ENST00000577543	RB1	P06400	928 aa		21.39	■■□□□ 1.01
TGIF1-222	ENST00000577543	CAPS	Q13938	189 aa		21.39	■■□□□ 1.01
TGIF1-222	ENST00000577543	PDIA5	Q14554	519 aa		21.39	■■□□□ 1.01
TGIF1-222	ENST00000577543	TIGD5	Q53EQ6	642 aa		21.39	■■□□□ 1.01
TGIF1-222	ENST00000577543	PP2D1	A8MPX8	630 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	ERLIN2	O94905	339 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	ATF7	P17544	494 aa	Predicted RBP	21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	ARL2	P36404	184 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	IL17A	Q16552	155 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	SPOUT1	Q5T280	376 aa	Known RBP	21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	KRT79	Q5XKE5	535 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	PADI6	Q6TGC4	694 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	MAEA	Q7L5Y9	396 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	LRRC43	Q8N309	656 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	INTS4	Q96HW7	963 aa	Known RBP	21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	TMEM117	Q9H0C3	514 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	GPRC5C	Q9NQ84	441 aa		21.38	■■□□□ 1.01
TGIF1-222	ENST00000577543	TCF20	Q9UGU0	1960 aa	Known RBP	21.37	■■□□□ 1.01
TGIF1-222	ENST00000577543	GLRA2	P23416	452 aa		21.37	■■□□□ 1.01
TGIF1-222	ENST00000577543	RAB27A	P51159	221 aa		21.37	■■□□□ 1.01
TGIF1-222	ENST00000577543	PTEN	P60484	403 aa		21.37	■■□□□ 1.01
TGIF1-222	ENST00000577543	ECM1	Q16610	540 aa		21.37	■■□□□ 1.01
TGIF1-222	ENST00000577543	ZNF598	Q86UK7	904 aa	Known RBP	21.37	■■□□□ 1.01

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms