RNA–Protein interactions for RNA: ENST00000577497.5

CUEDC1-204, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-204ENST00000577497 GRXCR2A6NFK2 248 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 EIF5BO60841 1220 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 DNM2P50570 870 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 TRIM29Q14134 588 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 CLUL1Q15846 466 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 CALCRLQ16602 461 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 NAALADL2Q58DX5 795 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 C4orf19Q8IY42 314 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 TMEM60Q9H2L4 133 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 DHX33Q9H6R0 707 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 IFT122Q9HBG6 1241 aa15.2■□□□□ 0.02
CUEDC1-204ENST00000577497 MEIS3P2A8K0S8 358 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 NEMFO60524 1076 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 FGF18O76093 207 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 SLITRK3O94933 977 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 BAG4O95429 457 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 ATP2B1P20020 1258 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 TXKP42681 527 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 POLGP54098 1239 aaPredicted RBP15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 EMC2Q15006 297 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 LONRF3Q496Y0 759 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 ZNF410Q86VK4 478 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 TPH2Q8IWU9 490 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 PRPF31Q8WWY3 499 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 SLC7A3Q8WY07 619 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 LPPQ93052 612 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 MTMR9Q96QG7 549 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 EIF2AK1Q9BQI3 630 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 ZSWIM4Q9H7M6 989 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 TTC12Q9H892 705 aaPredicted RBP15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 MINDY3Q9H8M7 445 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 PCDHA12Q9UN75 941 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 PIN4Q9Y237 131 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 PCDHB12Q9Y5F1 795 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 COL4A3BPQ9Y5P4 624 aa15.19■□□□□ 0.02
CUEDC1-204ENST00000577497 NCOR1O75376 2440 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 A0A087WWV3 80 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 POTEMA6NI47 508 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 DKC1O60832 514 aaKnown RBP eCLIP15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 SFPQP23246 707 aaKnown RBP eCLIP15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 PHKA2P46019 1235 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 NRIP1P48552 1158 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 ERVFC1P60507 584 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 RBM10P98175 930 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 XKR9Q5GH70 373 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 RBM23Q86U06 439 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 FAM178BQ8IXR5 827 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 THNSL1Q8IYQ7 743 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 LRRC43Q8N309 656 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 HSD17B14Q9BPX1 270 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 EPHX3Q9H6B9 360 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 XPNPEP1Q9NQW7 623 aa15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 RNF216Q9NWF9 866 aaPredicted RBP15.18■□□□□ 0.02
CUEDC1-204ENST00000577497 HOXA2O43364 376 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 GLP2RO95838 553 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 SRGAP2CP0DJJ0 459 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 LAG3P18627 525 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 MCM7P33993 719 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 RFC5P40937 340 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 CDC42EP1Q00587 391 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 LAMTOR4Q0VGL1 99 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 ADAM15Q13444 863 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 TWF2Q6IBS0 349 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 CATSPER4Q7RTX7 472 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 ABI1Q8IZP0 508 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 PSPC1Q8WXF1 523 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 C8orf76Q96K31 380 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 JPH2Q9BR39 696 aaPredicted RBP15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 LLPHQ9BRT6 129 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 TLR9Q9NR96 1032 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 CHST12Q9NRB3 414 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 AAASQ9NRG9 546 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
CUEDC1-204ENST00000577497 PER2O15055 1255 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 EOMESO95936 686 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 KCNT2Q6UVM3 1135 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 OTUD6AQ7L8S5 288 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 FERMT3Q86UX7 667 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 RNF149Q8NC42 400 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 VN1R2Q8NFZ6 395 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 MTRQ99707 1265 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 AGPAT5Q9NUQ2 364 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 CLEC1BQ9P126 229 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 RAPGEFL1Q9UHV5 662 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 BARX2Q9UMQ3 279 aaPredicted RBP15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 PPME1Q9Y570 386 aa15.16■□□□□ 0.02
CUEDC1-204ENST00000577497 FSCN2O14926 492 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 NCK2O43639 380 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 LYPLA2O95372 231 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 SPATA31C1P0DKV0 1188 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 RBM25P49756 843 aaKnown RBP15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 NDUFV1P49821 464 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 UBE3AQ05086 875 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 NBR1Q14596 966 aa15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 SAFBQ15424 915 aaKnown RBP eCLIP15.15■□□□□ 0.02
CUEDC1-204ENST00000577497 PUS10Q3MIT2 529 aaKnown RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms