RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 GLB1LQ6UWU2 654 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 LRRC71Q8N4P6 559 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 LINC01465Q8N7H1 131 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 C12orf76Q8N812 135 aaPredicted RBP15.09■□□□□ 0.01
COPS3-214ENST00000577246 EMILIN2Q9BXX0 1053 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 GCOM2Q9BZD3 368 aaPredicted RBP15.09■□□□□ 0.01
COPS3-214ENST00000577246 LSG1Q9H089 658 aaKnown RBP15.09■□□□□ 0.01
COPS3-214ENST00000577246 SEMA4AQ9H3S1 761 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 SMOC2Q9H3U7 446 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 PLXNA3P51805 1871 aa15.09■□□□□ 0.01
COPS3-214ENST00000577246 LOXHD1Q8IVV2 1947 aa15.08■□□□□ 0
COPS3-214ENST00000577246 ESYT2A0FGR8 921 aa15.08■□□□□ 0
COPS3-214ENST00000577246 NT5C1B-RDH14C9J2C7 533 aa15.08■□□□□ 0
COPS3-214ENST00000577246 SFPQP23246 707 aaKnown RBP eCLIP15.08■□□□□ 0
COPS3-214ENST00000577246 RCAN1P53805 252 aa15.08■□□□□ 0
COPS3-214ENST00000577246 RNASELQ05823 741 aaKnown RBP15.08■□□□□ 0
COPS3-214ENST00000577246 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
COPS3-214ENST00000577246 FUT2Q10981 343 aa15.08■□□□□ 0
COPS3-214ENST00000577246 ELMSAN1Q6PJG2 1045 aa15.08■□□□□ 0
COPS3-214ENST00000577246 CCDC105Q8IYK2 499 aa15.08■□□□□ 0
COPS3-214ENST00000577246 REXO1Q8N1G1 1221 aaKnown RBP15.08■□□□□ 0
COPS3-214ENST00000577246 CRYGNQ8WXF5 182 aa15.08■□□□□ 0
COPS3-214ENST00000577246 IGSF21Q96ID5 467 aa15.08■□□□□ 0
COPS3-214ENST00000577246 TRAIPQ9BWF2 469 aa15.08■□□□□ 0
COPS3-214ENST00000577246 INO80BQ9C086 356 aaPredicted RBP15.08■□□□□ 0
COPS3-214ENST00000577246 C6orf50Q9HD87 102 aa15.08■□□□□ 0
COPS3-214ENST00000577246 DUSP12Q9UNI6 340 aa15.08■□□□□ 0
COPS3-214ENST00000577246 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
COPS3-214ENST00000577246 GOLGA8AA7E2F4 631 aa15.07■□□□□ 0
COPS3-214ENST00000577246 GOLGA8BA8MQT2 603 aa15.07■□□□□ 0
COPS3-214ENST00000577246 EPCAMP16422 314 aa15.07■□□□□ 0
COPS3-214ENST00000577246 GNA11P29992 359 aa15.07■□□□□ 0
COPS3-214ENST00000577246 SFNP31947 248 aa15.07■□□□□ 0
COPS3-214ENST00000577246 PHKA2P46019 1235 aa15.07■□□□□ 0
COPS3-214ENST00000577246 DNM2P50570 870 aa15.07■□□□□ 0
COPS3-214ENST00000577246 RAB27AP51159 221 aa15.07■□□□□ 0
COPS3-214ENST00000577246 PRKCEQ02156 737 aa15.07■□□□□ 0
COPS3-214ENST00000577246 NECTIN1Q15223 517 aa15.07■□□□□ 0
COPS3-214ENST00000577246 NONOQ15233 471 aaKnown RBP eCLIP15.07■□□□□ 0
COPS3-214ENST00000577246 ANGPT1Q15389 498 aa15.07■□□□□ 0
COPS3-214ENST00000577246 PRR16Q569H4 304 aa15.07■□□□□ 0
COPS3-214ENST00000577246 CWF19L1Q69YN2 538 aaKnown RBP15.07■□□□□ 0
COPS3-214ENST00000577246 TWF2Q6IBS0 349 aaKnown RBP15.07■□□□□ 0
COPS3-214ENST00000577246 TMC5Q6UXY8 1006 aa15.07■□□□□ 0
COPS3-214ENST00000577246 C15orf39Q6ZRI6 1047 aa15.07■□□□□ 0
COPS3-214ENST00000577246 GPR149Q86SP6 731 aa15.07■□□□□ 0
COPS3-214ENST00000577246 SLC22A17Q8WUG5 538 aa15.07■□□□□ 0
COPS3-214ENST00000577246 IGSF9Q9P2J2 1179 aa15.07■□□□□ 0
COPS3-214ENST00000577246 DPP7Q9UHL4 492 aa15.07■□□□□ 0
COPS3-214ENST00000577246 RFX1P22670 979 aa15.06■□□□□ 0
COPS3-214ENST00000577246 JAK3P52333 1124 aa15.06■□□□□ 0
COPS3-214ENST00000577246 PFKFB3Q16875 520 aaPredicted RBP15.06■□□□□ 0
COPS3-214ENST00000577246 NOMO2Q5JPE7 1267 aa15.06■□□□□ 0
COPS3-214ENST00000577246 DTWD2Q8NBA8 298 aa15.06■□□□□ 0
COPS3-214ENST00000577246 BICD2Q8TD16 824 aa15.06■□□□□ 0
COPS3-214ENST00000577246 AUTS2Q8WXX7 1259 aa15.06■□□□□ 0
COPS3-214ENST00000577246 ZMYND12Q9H0C1 365 aa15.06■□□□□ 0
COPS3-214ENST00000577246 ANO2Q9NQ90 1003 aa15.06■□□□□ 0
COPS3-214ENST00000577246 DISC1Q9NRI5 854 aa15.06■□□□□ 0
COPS3-214ENST00000577246 GALTP07902 379 aa15.05■□□□□ -0
COPS3-214ENST00000577246 KLRC2P26717 231 aa15.05■□□□□ -0
COPS3-214ENST00000577246 CIITAP33076 1130 aa15.05■□□□□ -0
COPS3-214ENST00000577246 PTPN14Q15678 1187 aa15.05■□□□□ -0
COPS3-214ENST00000577246 CYP26C1Q6V0L0 522 aa15.05■□□□□ -0
COPS3-214ENST00000577246 ZNF410Q86VK4 478 aa15.05■□□□□ -0
COPS3-214ENST00000577246 SIX5Q8N196 739 aa15.05■□□□□ -0
COPS3-214ENST00000577246 URGCPQ8TCY9 931 aa15.05■□□□□ -0
COPS3-214ENST00000577246 KCNG4Q8TDN1 519 aa15.05■□□□□ -0
COPS3-214ENST00000577246 STAMQ92783 540 aa15.05■□□□□ -0
COPS3-214ENST00000577246 PGBD4Q96DM1 585 aa15.05■□□□□ -0
COPS3-214ENST00000577246 ZNF668Q96K58 619 aaPredicted RBP15.05■□□□□ -0
COPS3-214ENST00000577246 RIT2Q99578 217 aa15.05■□□□□ -0
COPS3-214ENST00000577246 ESYT1Q9BSJ8 1104 aa15.05■□□□□ -0
COPS3-214ENST00000577246 KCNK12Q9HB15 430 aa15.05■□□□□ -0
COPS3-214ENST00000577246 TBC1D13Q9NVG8 400 aa15.05■□□□□ -0
COPS3-214ENST00000577246 PIN4Q9Y237 131 aaKnown RBP15.05■□□□□ -0
COPS3-214ENST00000577246 PTPRZ1P23471 2315 aaPredicted RBP15.04■□□□□ -0
COPS3-214ENST00000577246 STK25O00506 426 aa15.04■□□□□ -0
COPS3-214ENST00000577246 ZNF862O60290 1169 aa15.04■□□□□ -0
COPS3-214ENST00000577246 GAS7O60861 476 aa15.04■□□□□ -0
COPS3-214ENST00000577246 LMNAP02545 664 aaKnown RBP15.04■□□□□ -0
COPS3-214ENST00000577246 FGFR4P22455 802 aa15.04■□□□□ -0
COPS3-214ENST00000577246 COL9A3Q14050 684 aaPredicted RBP15.04■□□□□ -0
COPS3-214ENST00000577246 LETM2Q2VYF4 491 aa15.04■□□□□ -0
COPS3-214ENST00000577246 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
COPS3-214ENST00000577246 TMEM173Q86WV6 379 aaPredicted RBP15.04■□□□□ -0
COPS3-214ENST00000577246 RDM1Q8NG50 284 aa15.04■□□□□ -0
COPS3-214ENST00000577246 JPH2Q9BR39 696 aaPredicted RBP15.04■□□□□ -0
COPS3-214ENST00000577246 NRDE2Q9H7Z3 1164 aa15.04■□□□□ -0
COPS3-214ENST00000577246 MRPL17Q9NRX2 175 aaKnown RBP15.04■□□□□ -0
COPS3-214ENST00000577246 FAM105AQ9NUU6 356 aa15.04■□□□□ -0
COPS3-214ENST00000577246 WNT16Q9UBV4 365 aa15.04■□□□□ -0
COPS3-214ENST00000577246 SSX2IPQ9Y2D8 614 aa15.04■□□□□ -0
COPS3-214ENST00000577246 INPP5FQ9Y2H2 1132 aa15.04■□□□□ -0
COPS3-214ENST00000577246 KLF18A0A0U1RQI7 1052 aa15.03■□□□□ -0
COPS3-214ENST00000577246 ZNF623O75123 536 aa15.03■□□□□ -0
COPS3-214ENST00000577246 HMGB1P09429 215 aaKnown RBP15.03■□□□□ -0
COPS3-214ENST00000577246 NPR3P17342 541 aa15.03■□□□□ -0
COPS3-214ENST00000577246 CLCN4P51793 760 aa15.03■□□□□ -0
COPS3-214ENST00000577246 FGD1P98174 961 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms