RNA–Protein interactions for RNA: ENST00000577169.1

NCBP3-207, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-207ENST00000577169 DENND3A2RUS2 1198 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 LCHNA4D1U4 455 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 ARHGEF15O94989 841 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
NCBP3-207ENST00000577169 IBSPP21815 317 aaPredicted RBP17.43■□□□□ 0.38
NCBP3-207ENST00000577169 GLRA2P23416 452 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 HTRA4P83105 476 aaPredicted RBP17.43■□□□□ 0.38
NCBP3-207ENST00000577169 GRIN2CQ14957 1233 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 SPECC1Q5M775 1068 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 FAM102BQ5T8I3 360 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 SRGAP1Q7Z6B7 1085 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 MCPH1Q8NEM0 835 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 CLIC6Q96NY7 704 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 NT5C3AQ9H0P0 336 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 CSRNP2Q9H175 543 aa17.43■□□□□ 0.38
NCBP3-207ENST00000577169 DAXXQ9UER7 740 aaPredicted RBP17.43■□□□□ 0.38
NCBP3-207ENST00000577169 TTC3P53804 2025 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 C9IYK1 514 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 NASPP49321 788 aaPredicted RBP17.42■□□□□ 0.38
NCBP3-207ENST00000577169 SARSP49591 514 aaKnown RBP17.42■□□□□ 0.38
NCBP3-207ENST00000577169 FAM189BP81408 668 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 TAP1Q03518 808 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 POU5F1BQ06416 359 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 TFDP1Q14186 410 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 STK38Q15208 465 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 PPP2R2DQ66LE6 453 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 SLC24A5Q71RS6 500 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 CATSPER4Q7RTX7 472 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 CRIPAKQ8N1N5 446 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 LINC00301Q8NCQ3 95 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 CALML4Q96GE6 196 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 EPSTI1Q96J88 318 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 MINDY3Q9H8M7 445 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 C1orf112Q9NSG2 853 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 ZDHHC9Q9Y397 364 aa17.42■□□□□ 0.38
NCBP3-207ENST00000577169 SLC26A4O43511 780 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 STAG3L1P0CL83 205 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 SFPQP23246 707 aaKnown RBP eCLIP17.41■□□□□ 0.38
NCBP3-207ENST00000577169 PHKA2P46019 1235 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 PTENP60484 403 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 CAPSQ13938 189 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 TMEM119Q4V9L6 283 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 RINT1Q6NUQ1 792 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 NPAS4Q8IUM7 802 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 KCTD17Q8N5Z5 321 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 GUCD1Q96NT3 240 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 YME1L1Q96TA2 773 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 CCSER1Q9C0I3 900 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 CERS4Q9HA82 394 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 CHST12Q9NRB3 414 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 LRFN2Q9ULH4 789 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 PCDHB7Q9Y5E2 793 aa17.41■□□□□ 0.38
NCBP3-207ENST00000577169 MORC2Q9Y6X9 1032 aaPredicted RBP17.41■□□□□ 0.38
NCBP3-207ENST00000577169 DGKIO75912 1065 aa17.4■□□□□ 0.38
NCBP3-207ENST00000577169 BRD1O95696 1058 aa17.4■□□□□ 0.38
NCBP3-207ENST00000577169 SSBP05455 408 aaKnown RBP eCLIP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 KARSQ15046 597 aaKnown RBP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 C1orf186Q6ZWK4 172 aa17.4■□□□□ 0.38
NCBP3-207ENST00000577169 SPRED2Q7Z698 418 aa17.4■□□□□ 0.38
NCBP3-207ENST00000577169 IFNLR1Q8IU57 520 aaPredicted RBP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 SYT2Q8N9I0 419 aaPredicted RBP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 KRI1Q8N9T8 703 aaKnown RBP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 ZNF689Q96CS4 500 aaPredicted RBP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 CDX2Q99626 313 aaPredicted RBP17.4■□□□□ 0.38
NCBP3-207ENST00000577169 MYH15Q9Y2K3 1946 aa17.4■□□□□ 0.38
NCBP3-207ENST00000577169 LINC01553A4QN01 128 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 LRRIQ4A6NIV6 560 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 SPTLC2O15270 562 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 PLA2G4BP0C869 781 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 SP7Q8TDD2 431 aaPredicted RBP17.39■□□□□ 0.37
NCBP3-207ENST00000577169 LRRC15Q8TF66 581 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 BSNDQ8WZ55 320 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 RUSC1Q9BVN2 902 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 PRDM12Q9H4Q4 367 aa17.39■□□□□ 0.37
NCBP3-207ENST00000577169 INO80B-WBP1J3KQ70 363 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 RFXAPO00287 272 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 PPP6R2O75170 966 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 YEATS4O95619 227 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 PLCG1P19174 1290 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 GATMP50440 423 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 SLC12A3P55017 1021 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 DNM1Q05193 864 aaKnown RBP17.38■□□□□ 0.37
NCBP3-207ENST00000577169 DHX8Q14562 1220 aaKnown RBP17.38■□□□□ 0.37
NCBP3-207ENST00000577169 ATL3Q6DD88 541 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 ECHDC2Q86YB7 292 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 RASSF8Q8NHQ8 419 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 MYLIPQ8WY64 445 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 SYMPKQ92797 1274 aaKnown RBP17.38■□□□□ 0.37
NCBP3-207ENST00000577169 KIFAP3Q92845 792 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 ELAC1Q9H777 363 aaKnown RBP17.38■□□□□ 0.37
NCBP3-207ENST00000577169 BLOC1S4Q9NUP1 217 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 RNF216Q9NWF9 866 aaPredicted RBP17.38■□□□□ 0.37
NCBP3-207ENST00000577169 TMEM161AQ9NX61 479 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
NCBP3-207ENST00000577169 PIN4Q9Y237 131 aaKnown RBP17.38■□□□□ 0.37
NCBP3-207ENST00000577169 A0A0U1RQF3 1178 aa17.37■□□□□ 0.37
NCBP3-207ENST00000577169 SFI1A8K8P3 1242 aa17.37■□□□□ 0.37
NCBP3-207ENST00000577169 HIP1RO75146 1068 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms