RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 ZDHHC24Q6UX98 284 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 PRUNE1Q86TP1 453 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 VSIG1Q86XK7 387 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 PIDD1Q9HB75 910 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 ZDHHC18Q9NUE0 388 aa15.69■□□□□ 0.1
SCARF1-209ENST00000576012 AFF2P51816 1311 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 SNAP25P60880 206 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 AUHQ13825 339 aaKnown RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 DUPD1Q68J44 220 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 SRRM1Q8IYB3 904 aaKnown RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 PROM2Q8N271 834 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 ACP6Q9NPH0 428 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 SLC5A4Q9NY91 659 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 SUCLA2Q9P2R7 463 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 SRRM3A6NNA2 597 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 KIAA0391O15091 583 aaKnown RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 TAL1P17542 331 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 CALRP27797 417 aaKnown RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 STAT1P42224 750 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 CRKLP46109 303 aaKnown RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 TUBP50607 506 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 RAD23BP54727 409 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 GRIK3Q13003 919 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 PICALMQ13492 652 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 TBC1D10BQ4KMP7 808 aaPredicted RBP15.68■□□□□ 0.1
SCARF1-209ENST00000576012 TTC27Q6P3X3 843 aa15.68■□□□□ 0.1
SCARF1-209ENST00000576012 SPDYE5A6NIY4 337 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 EDIL3O43854 480 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 RASA1P20936 1047 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 STX2P32856 288 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 INHBEP58166 350 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 ZNF268Q14587 947 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 ITIH4Q14624 930 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 RBM26Q5T8P6 1007 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 CCDC137Q6PK04 289 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 NSMFQ6X4W1 530 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 MAB21L3Q8N8X9 362 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 DAGLBQ8NCG7 672 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 C1orf54Q8WWF1 131 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 SPOCK2Q92563 424 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 P3H4Q92791 437 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 HAO1Q9UJM8 370 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 DPPA5A6NC42 116 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 SMNDC1O75940 238 aaKnown RBP eCLIP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 PCP11498 1178 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 CYP2J2P51589 502 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 MXRA7P84157 204 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 UBE4AQ14139 1066 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 CTTNQ14247 550 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 SYCE1Q8N0S2 351 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 HAS1Q92839 578 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 TGS1Q96RS0 853 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 CPSF2Q9P2I0 782 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 MTRF1LQ9UGC7 380 aaKnown RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 CFAP73A6NFT4 308 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 HIP1RO75146 1068 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 SPAG7O75391 227 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 IL6STP40189 918 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 PTENP60484 403 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 MPP2Q14168 576 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 DRAP1Q14919 205 aaPredicted RBP15.67■□□□□ 0.1
SCARF1-209ENST00000576012 KYNUQ16719 465 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 C6orf118Q5T5N4 469 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 SPATA21Q7Z572 469 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 HES6Q96HZ4 224 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 CRAMP1Q96RY5 1269 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 COG5Q9UP83 839 aa15.67■□□□□ 0.1
SCARF1-209ENST00000576012 NTSR2O95665 410 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 TNFAIP3P21580 790 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 POU5F1Q01860 360 aaKnown RBP15.66■□□□□ 0.1
SCARF1-209ENST00000576012 MAPK7Q13164 816 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 ZDHHC14Q8IZN3 488 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCARF1-209ENST00000576012 KCTD10Q9H3F6 313 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 ZNF804BA4D1E1 1349 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 ERVV-1B6SEH8 477 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 LINGO3P0C6S8 592 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 BRAFP15056 766 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 CYP11B2P19099 503 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 CCND1P24385 295 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 RFX8Q6ZV50 586 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 KCTD1Q719H9 257 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 PTF1AQ7RTS3 328 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 NAF1Q96HR8 494 aaKnown RBP15.66■□□□□ 0.1
SCARF1-209ENST00000576012 ANKIB1Q9P2G1 1089 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 ASIC3Q9UHC3 531 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 STXBP5LQ9Y2K9 1186 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 ALG6Q9Y672 507 aa15.66■□□□□ 0.1
SCARF1-209ENST00000576012 RIPK2O43353 540 aa15.65■□□□□ 0.1
SCARF1-209ENST00000576012 MED24O75448 989 aa15.65■□□□□ 0.1
SCARF1-209ENST00000576012 LDHBP07195 334 aaKnown RBP15.65■□□□□ 0.1
SCARF1-209ENST00000576012 CDK8P49336 464 aa15.65■□□□□ 0.1
SCARF1-209ENST00000576012 PSMD2Q13200 908 aa15.65■□□□□ 0.1
SCARF1-209ENST00000576012 COG2Q14746 738 aa15.65■□□□□ 0.1
SCARF1-209ENST00000576012 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
SCARF1-209ENST00000576012 SLC20A1Q8WUM9 679 aa15.65■□□□□ 0.1
SCARF1-209ENST00000576012 CEP63Q96MT8 703 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms