RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 XKR9Q5GH70 373 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 TCEAL5Q5H9L2 206 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 NOSTRINQ8IVI9 506 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 KLHL23Q8NBE8 558 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 PRPF31Q8WWY3 499 aaKnown RBP22■■□□□ 1.11
SCARF1-208ENST00000574545 TMEM143Q96AN5 459 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 SCLT1Q96NL6 688 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 CASD1Q96PB1 797 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 INO80BQ9C086 356 aaPredicted RBP22■■□□□ 1.11
SCARF1-208ENST00000574545 NSUN3Q9H649 340 aaKnown RBP22■■□□□ 1.11
SCARF1-208ENST00000574545 CWH43Q9H720 699 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 UBE2ZQ9H832 354 aaPredicted RBP22■■□□□ 1.11
SCARF1-208ENST00000574545 ALG13Q9NP73 1137 aaKnown RBP22■■□□□ 1.11
SCARF1-208ENST00000574545 COL4A3BPQ9Y5P4 624 aa22■■□□□ 1.11
SCARF1-208ENST00000574545 POTEMA6NI47 508 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 ST18O60284 1047 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 ATF7P17544 494 aaPredicted RBP21.99■■□□□ 1.11
SCARF1-208ENST00000574545 EMC2Q15006 297 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 ZNF174Q15697 407 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 C4orf32Q8N8J7 132 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 ADAMTS19Q8TE59 1207 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 TMX3Q96JJ7 454 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 TBC1D32Q96NH3 1257 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 TMEM117Q9H0C3 514 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 ANKEF1Q9NU02 776 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 TYW1Q9NV66 732 aaKnown RBP21.99■■□□□ 1.11
SCARF1-208ENST00000574545 HCSTQ9UBK5 93 aa21.99■■□□□ 1.11
SCARF1-208ENST00000574545 TCF20Q9UGU0 1960 aaKnown RBP21.99■■□□□ 1.11
SCARF1-208ENST00000574545 GAS2O43903 313 aaKnown RBP21.98■■□□□ 1.11
SCARF1-208ENST00000574545 EOMESO95936 686 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 XRCC6P12956 609 aaKnown RBP eCLIP21.98■■□□□ 1.11
SCARF1-208ENST00000574545 SFPQP23246 707 aaKnown RBP eCLIP21.98■■□□□ 1.11
SCARF1-208ENST00000574545 TRAPPC10P48553 1259 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 LAMTOR4Q0VGL1 99 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 LRRC55Q6ZSA7 311 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 FERMT3Q86UX7 667 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 PSPC1Q8WXF1 523 aaKnown RBP21.98■■□□□ 1.11
SCARF1-208ENST00000574545 NLRP4Q96MN2 994 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 MINDY3Q9H8M7 445 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 DACT1Q9NYF0 836 aa21.98■■□□□ 1.11
SCARF1-208ENST00000574545 ASAP2O43150 1006 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 RARRES1P49788 294 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 TOB1P50616 345 aaPredicted RBP21.97■■□□□ 1.11
SCARF1-208ENST00000574545 CLLU1OSQ5K130 101 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 TTC38Q5R3I4 469 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 SRGAP1Q7Z6B7 1085 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 CATSPER3Q86XQ3 398 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 TCP11Q8WWU5 503 aa21.97■■□□□ 1.11
SCARF1-208ENST00000574545 UPF2Q9HAU5 1272 aaKnown RBP21.97■■□□□ 1.11
SCARF1-208ENST00000574545 BMP2KQ9NSY1 1161 aaPredicted RBP21.97■■□□□ 1.11
SCARF1-208ENST00000574545 ARID2Q68CP9 1835 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 A0A087WWV3 80 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 HOXA2O43364 376 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 MED24O75448 989 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 OR52Z1P0C646 297 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 TECP42680 631 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 PHKA2P46019 1235 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 PIGOQ8TEQ8 1089 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 POF1BQ8WVV4 589 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 PABPC5Q96DU9 382 aaKnown RBP21.96■■□□□ 1.11
SCARF1-208ENST00000574545 UHRF1Q96T88 793 aaPredicted RBP21.96■■□□□ 1.11
SCARF1-208ENST00000574545 MTRQ99707 1265 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 POLR3CQ9BUI4 534 aaPredicted RBP21.96■■□□□ 1.11
SCARF1-208ENST00000574545 BDP1A6H8Y1 2624 aa21.96■■□□□ 1.11
SCARF1-208ENST00000574545 ZNF623O75123 536 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 DGAT1O75907 488 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 SRGAP2CP0DJJ0 459 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 HOXA11P31270 313 aaPredicted RBP21.95■■□□□ 1.1
SCARF1-208ENST00000574545 IRS1P35568 1242 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 ARL2P36404 184 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 NBR1Q14596 966 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 CTC1Q2NKJ3 1217 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 LEXMQ3ZCV2 418 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 CATSPER4Q7RTX7 472 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 COLGALT1Q8NBJ5 622 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.95■■□□□ 1.1
SCARF1-208ENST00000574545 TUFT1Q9NNX1 390 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 PCDHB12Q9Y5F1 795 aa21.95■■□□□ 1.1
SCARF1-208ENST00000574545 TNFRSF10AO00220 468 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 LTBRP36941 435 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 POU5F1BQ06416 359 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 HYAL1Q12794 435 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 IFNLR1Q8IU57 520 aaPredicted RBP21.94■■□□□ 1.1
SCARF1-208ENST00000574545 RNF149Q8NC42 400 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 NECAB3Q96P71 396 aaPredicted RBP21.94■■□□□ 1.1
SCARF1-208ENST00000574545 AAASQ9NRG9 546 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 AGPAT5Q9NUQ2 364 aa21.94■■□□□ 1.1
SCARF1-208ENST00000574545 PIN4Q9Y237 131 aaKnown RBP21.94■■□□□ 1.1
SCARF1-208ENST00000574545 KCNA5P22460 613 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 RPA1P27694 616 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 MCM2P49736 904 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 FXR2P51116 673 aaKnown RBP eCLIP21.93■■□□□ 1.1
SCARF1-208ENST00000574545 PTENP60484 403 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 UBE3AQ05086 875 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 MXD4Q14582 209 aaPredicted RBP21.93■■□□□ 1.1
SCARF1-208ENST00000574545 ASAP3Q8TDY4 903 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 PLXNA4Q9HCM2 1894 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 FAM105AQ9NUU6 356 aa21.93■■□□□ 1.1
SCARF1-208ENST00000574545 NOL7Q9UMY1 257 aaKnown RBP21.93■■□□□ 1.1
SCARF1-208ENST00000574545 PCDHB6Q9Y5E3 794 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms