RNA–Protein interactions for RNA: ENST00000573554.1

RPS15A-209, Transcript of ribosomal protein S15a, human

TSL 1 (best)

Gene RPS15A, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS15A-209	ENST00000573554	ATF7	P17544	494 aa	Predicted RBP	18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	YWHAB	P31946	246 aa	Known RBP	18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	CYP4A11	Q02928	519 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	CALCRL	Q16602	461 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	CLLU1OS	Q5K130	101 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	COLGALT1	Q8NBJ5	622 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	TMEM143	Q96AN5	459 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	NLRP4	Q96MN2	994 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	MTMR9	Q96QG7	549 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	HSD17B14	Q9BPX1	270 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	EIF2AK1	Q9BQI3	630 aa	Known RBP	18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	JPH2	Q9BR39	696 aa	Predicted RBP	18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	IGFLR1	Q9H665	355 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	ZSWIM4	Q9H7M6	989 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	TTC12	Q9H892	705 aa	Predicted RBP	18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	IFT122	Q9HBG6	1241 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	PCDHB12	Q9Y5F1	795 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	PCDHGC5	Q9Y5F6	944 aa		18.75	■□□□□ 0.59
RPS15A-209	ENST00000573554	NCK2	O43639	380 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	FGF18	O76093	207 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	TPH2	Q8IWU9	490 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	FAM178B	Q8IXR5	827 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	RNF169	Q8NCN4	708 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	PRPF31	Q8WWY3	499 aa	Known RBP	18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	SLC7A3	Q8WY07	619 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.74	■□□□□ 0.59	3e-16	■□□□□ 10.8
RPS15A-209	ENST00000573554	TMEM60	Q9H2L4	133 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	CHST12	Q9NRB3	414 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	AAAS	Q9NRG9	546 aa		18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	BMP2K	Q9NSY1	1161 aa	Predicted RBP	18.74	■□□□□ 0.59
RPS15A-209	ENST00000573554	ARID2	Q68CP9	1835 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	NEMF	O60524	1076 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	EOMES	O95936	686 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	RFC5	P40937	340 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	TXK	P42681	527 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	POLG	P54098	1239 aa	Predicted RBP	18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	ADAM15	Q13444	863 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	XKR9	Q5GH70	373 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	OTUD6A	Q7L8S5	288 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	LLPH	Q9BRT6	129 aa	Known RBP	18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	TRAIP	Q9BWF2	469 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	INO80B	Q9C086	356 aa	Predicted RBP	18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	DACT1	Q9NYF0	836 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	PPME1	Q9Y570	386 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	COL4A3BP	Q9Y5P4	624 aa		18.73	■□□□□ 0.59
RPS15A-209	ENST00000573554	HOXA2	O43364	376 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	TBX10	O75333	385 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	LAG3	P18627	525 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	SFPQ	P23246	707 aa	Known RBP eCLIP	18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	ERVFC1	P60507	584 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	UBE3A	Q05086	875 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	PUS10	Q3MIT2	529 aa	Known RBP	18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	THNSL1	Q8IYQ7	743 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	C8orf76	Q96K31	380 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	ZSCAN31	Q96LW9	406 aa	Predicted RBP	18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554	MINDY3	Q9H8M7	445 aa		18.72	■□□□□ 0.59
RPS15A-209	ENST00000573554		A0A087WWV3	80 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	LYPLA2	O95372	231 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	SRGAP2C	P0DJJ0	459 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	ATP2B1	P20020	1258 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	MCM7	P33993	719 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	PBX3	P40426	434 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	PHKA2	P46019	1235 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	RBM25	P49756	843 aa	Known RBP	18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	LAMTOR4	Q0VGL1	99 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	EMC2	Q15006	297 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	KCNT2	Q6UVM3	1135 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	RBM23	Q86U06	439 aa	Known RBP	18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	EXOC8	Q8IYI6	725 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	ABI1	Q8IZP0	508 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	HELQ	Q8TDG4	1101 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	PSPC1	Q8WXF1	523 aa	Known RBP	18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	EPHX3	Q9H6B9	360 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	XPNPEP1	Q9NQW7	623 aa		18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	PIN4	Q9Y237	131 aa	Known RBP	18.71	■□□□□ 0.59
RPS15A-209	ENST00000573554	POTEM	A6NI47	508 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	MEIS3P2	A8K0S8	358 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	NRIP1	P48552	1158 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	PLCB3	Q01970	1234 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	SAFB	Q15424	915 aa	Known RBP eCLIP	18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	CLUL1	Q15846	466 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	CSPP1	Q1MSJ5	1256 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	LONRF3	Q496Y0	759 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	TWF2	Q6IBS0	349 aa	Known RBP	18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	CATSPER4	Q7RTX7	472 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	FERMT3	Q86UX7	667 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	LRRC43	Q8N309	656 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	FBXO18	Q8NFZ0	1043 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	MICAL1	Q8TDZ2	1067 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	LPP	Q93052	612 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	TLR9	Q9NR96	1032 aa		18.7	■□□□□ 0.58
RPS15A-209	ENST00000573554	FSCN2	O14926	492 aa		18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	PER2	O15055	1255 aa		18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	GAS2	O43903	313 aa	Known RBP	18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	ZNF623	O75123	536 aa		18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	HOXA11	P31270	313 aa	Predicted RBP	18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	SRGAP1	Q7Z6B7	1085 aa		18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	GJD3	Q8N144	294 aa		18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	EFHB	Q8N7U6	833 aa		18.69	■□□□□ 0.58
RPS15A-209	ENST00000573554	TCP11	Q8WWU5	503 aa		18.69	■□□□□ 0.58

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms