RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 INO80BQ9C086 356 aaPredicted RBP18■□□□□ 0.47
NDE1-205ENST00000572756 RNF19AQ9NV58 838 aa18■□□□□ 0.47
NDE1-205ENST00000572756 RWDD3Q9Y3V2 267 aa18■□□□□ 0.47
NDE1-205ENST00000572756 VCANP13611 3396 aa18■□□□□ 0.47
NDE1-205ENST00000572756 A0A087WWV3 80 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 H3BQV1 296 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 ASAP2O43150 1006 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 DGAT1O75907 488 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 ZSCAN20P17040 1043 aaPredicted RBP17.99■□□□□ 0.47
NDE1-205ENST00000572756 SFPQP23246 707 aaKnown RBP eCLIP17.99■□□□□ 0.47
NDE1-205ENST00000572756 CTNNB1P35222 781 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 PAN2Q504Q3 1202 aaKnown RBP17.99■□□□□ 0.47
NDE1-205ENST00000572756 RILPL1Q5EBL4 403 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 FAM102BQ5T8I3 360 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 ECHDC2Q86YB7 292 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 IGSF22Q8N9C0 903 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 ERMNQ8TAM6 284 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 TRAIPQ9BWF2 469 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 ATP6V0A4Q9HBG4 840 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 CHST12Q9NRB3 414 aa17.99■□□□□ 0.47
NDE1-205ENST00000572756 DBR1Q9UK59 544 aaKnown RBP17.99■□□□□ 0.47
NDE1-205ENST00000572756 XIRP2A4UGR9 3374 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 A0A0U1RQF3 1178 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 LAD1O00515 517 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 FGFR1P11362 822 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 MUTP22033 750 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 ARL2P36404 184 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 PRPHP41219 470 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 GPM6BQ13491 265 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 PDIA5Q14554 519 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 IL17AQ16552 155 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 LARP1BQ659C4 914 aaKnown RBP17.98■□□□□ 0.47
NDE1-205ENST00000572756 POTEGQ6S5H5 508 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 SRGAP1Q7Z6B7 1085 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 ZNF598Q86UK7 904 aaKnown RBP17.98■□□□□ 0.47
NDE1-205ENST00000572756 MRPL38Q96DV4 380 aaKnown RBP17.98■□□□□ 0.47
NDE1-205ENST00000572756 PLVAPQ9BX97 442 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 MINDY3Q9H8M7 445 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 CUL9Q8IWT3 2517 aa17.98■□□□□ 0.47
NDE1-205ENST00000572756 PLXNA4Q9HCM2 1894 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 SRGAP2CP0DJJ0 459 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 ATF7P17544 494 aaPredicted RBP17.97■□□□□ 0.47
NDE1-205ENST00000572756 IBSPP21815 317 aaPredicted RBP17.97■□□□□ 0.47
NDE1-205ENST00000572756 MXD4Q14582 209 aaPredicted RBP17.97■□□□□ 0.47
NDE1-205ENST00000572756 ECM1Q16610 540 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 HAUS3Q68CZ6 603 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 RNF149Q8NC42 400 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 P2RX5Q93086 422 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 NACC1Q96RE7 527 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 C11orf84Q9BUA3 381 aaPredicted RBP17.97■□□□□ 0.47
NDE1-205ENST00000572756 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 THEGQ9P2T0 379 aa17.97■□□□□ 0.47
NDE1-205ENST00000572756 TBKBP1A7MCY6 615 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 ATP2C1P98194 919 aaPredicted RBP17.96■□□□□ 0.47
NDE1-205ENST00000572756 POU5F1BQ06416 359 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 CATSPER4Q7RTX7 472 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 IFNLR1Q8IU57 520 aaPredicted RBP17.96■□□□□ 0.47
NDE1-205ENST00000572756 ASAP3Q8TDY4 903 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 CASD1Q96PB1 797 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 AGPAT5Q9NUQ2 364 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 LRWD1Q9UFC0 647 aa17.96■□□□□ 0.47
NDE1-205ENST00000572756 PIN4Q9Y237 131 aaKnown RBP17.96■□□□□ 0.47
NDE1-205ENST00000572756 GRM6O15303 877 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 HOXA2O43364 376 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 USO1O60763 962 aaKnown RBP17.95■□□□□ 0.46
NDE1-205ENST00000572756 EOMESO95936 686 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 GLRA2P23416 452 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 PHKA2P46019 1235 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 PTENP60484 403 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 CAPSQ13938 189 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 PTPROQ16827 1216 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 NAALADL2Q58DX5 795 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 CLLU1OSQ5K130 101 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 ATXN2LQ8WWM7 1075 aaKnown RBP17.95■□□□□ 0.46
NDE1-205ENST00000572756 INTS4Q96HW7 963 aaKnown RBP17.95■□□□□ 0.46
NDE1-205ENST00000572756 CCDC43Q96MW1 224 aaKnown RBP17.95■□□□□ 0.46
NDE1-205ENST00000572756 RAB34Q9BZG1 259 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 TMEM117Q9H0C3 514 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 HCSTQ9UBK5 93 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 STK24Q9Y6E0 443 aa17.95■□□□□ 0.46
NDE1-205ENST00000572756 HOXA11P31270 313 aaPredicted RBP17.94■□□□□ 0.46
NDE1-205ENST00000572756 CCT6AP40227 531 aaKnown RBP17.94■□□□□ 0.46
NDE1-205ENST00000572756 TWF2Q6IBS0 349 aaKnown RBP17.94■□□□□ 0.46
NDE1-205ENST00000572756 DTHD1Q6ZMT9 781 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 LRRC55Q6ZSA7 311 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 MCPH1Q8NEM0 835 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 MMTAG2Q9BU76 263 aaKnown RBP17.94■□□□□ 0.46
NDE1-205ENST00000572756 NFKBIZQ9BYH8 718 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 LMAN2LQ9H0V9 348 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
NDE1-205ENST00000572756 CWH43Q9H720 699 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 TYW1Q9NV66 732 aaKnown RBP17.94■□□□□ 0.46
NDE1-205ENST00000572756 PLAGL2Q9UPG8 496 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
NDE1-205ENST00000572756 PP2D1A8MPX8 630 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 K7ELQ4 463 aaPredicted RBP17.93■□□□□ 0.46
NDE1-205ENST00000572756 ZNF623O75123 536 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 ITGB1P05556 798 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 CAMK1Q14012 370 aa17.93■□□□□ 0.46
NDE1-205ENST00000572756 TFDP1Q14186 410 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms