RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 RILPL2Q969X0 211 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 MTA3Q9BTC8 594 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 EMILIN2Q9BXX0 1053 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 OSBPL6Q9BZF3 934 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 F5P12259 2224 aa11.53□□□□□ -0.56
CHMP6-203ENST00000572525 ZFYVE26Q68DK2 2539 aa11.52□□□□□ -0.56
CHMP6-203ENST00000572525 STK25O00506 426 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 NARSO43776 548 aaKnown RBP11.52□□□□□ -0.57
CHMP6-203ENST00000572525 N4BP1O75113 896 aaKnown RBP11.52□□□□□ -0.57
CHMP6-203ENST00000572525 DDAH1O94760 285 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 CFHP08603 1231 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 SKIP12755 728 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 CEP55Q53EZ4 464 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 KANK3Q6NY19 840 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 LINC01465Q8N7H1 131 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 ZBTB44Q8NCP5 570 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 CTCFLQ8NI51 663 aaPredicted RBP11.52□□□□□ -0.57
CHMP6-203ENST00000572525 HDAC7Q8WUI4 952 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 NELL1Q92832 810 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 SHDQ96IW2 340 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 MAP7D2Q96T17 732 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 EPC1Q9H2F5 836 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 CHST12Q9NRB3 414 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 PKD2L1Q9P0L9 805 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 NCDNQ9UBB6 729 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 CDV3Q9UKY7 258 aaKnown RBP11.52□□□□□ -0.57
CHMP6-203ENST00000572525 PCDHA6Q9UN73 950 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 PCDHA8Q9Y5H6 950 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 MAFBQ9Y5Q3 323 aaPredicted RBP11.52□□□□□ -0.57
CHMP6-203ENST00000572525 ZFP37Q9Y6Q3 630 aaPredicted RBP11.52□□□□□ -0.57
CHMP6-203ENST00000572525 CLUHO75153 1309 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 GREB1Q4ZG55 1949 aa11.52□□□□□ -0.57
CHMP6-203ENST00000572525 MEIS1O00470 390 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 LILRB3O75022 631 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 VTNP04004 478 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 TMOD1P28289 359 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 ITGB3BPQ13352 177 aaPredicted RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 HDAC1Q13547 482 aaPredicted RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 PDXDC2PQ6P474 469 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 TMEM173Q86WV6 379 aaPredicted RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 CCDC60Q8IWA6 550 aaPredicted RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 MAML2Q8IZL2 1156 aaPredicted RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 DDX23Q9BUQ8 820 aaKnown RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 ADAMTS10Q9H324 1103 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 AGO4Q9HCK5 861 aaKnown RBP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 ZNF302Q9NR11 478 aa11.51□□□□□ -0.57
CHMP6-203ENST00000572525 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.51□□□□□ -0.57
CHMP6-203ENST00000572525 NT5C1B-RDH14C9J2C7 533 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 ANHXE9PGG2 379 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 BACH1O14867 736 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 LILRB5O75023 590 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 ZNF623O75123 536 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
CHMP6-203ENST00000572525 DCNP07585 359 aaKnown RBP11.5□□□□□ -0.57
CHMP6-203ENST00000572525 GALTP07902 379 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 DARSP14868 501 aaKnown RBP11.5□□□□□ -0.57
CHMP6-203ENST00000572525 CA8P35219 290 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 DCLRE1AQ6PJP8 1040 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 RSPO2Q6UXX9 243 aaPredicted RBP11.5□□□□□ -0.57
CHMP6-203ENST00000572525 GPR65Q8IYL9 337 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 GPR152Q8TDT2 470 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 AUTS2Q8WXX7 1259 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 FAM167AQ96KS9 214 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 KLHL5Q96PQ7 755 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 FAM126AQ9BYI3 521 aaPredicted RBP11.5□□□□□ -0.57
CHMP6-203ENST00000572525 LY9Q9HBG7 655 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 CA14Q9ULX7 337 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 SSX2IPQ9Y2D8 614 aa11.5□□□□□ -0.57
CHMP6-203ENST00000572525 U3KPZ7 1027 aaPredicted RBP11.5□□□□□ -0.57
CHMP6-203ENST00000572525 SPDYE4A6NLX3 237 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 LAMTOR5O43504 91 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 TBC1D4O60343 1298 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 LRP3O75074 770 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 CCNE2O96020 404 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 ADH1AP07327 375 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 CNPP09543 421 aaKnown RBP11.49□□□□□ -0.57
CHMP6-203ENST00000572525 GLULP15104 373 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 ATP4AP20648 1035 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 TGM1P22735 817 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 KLRC2P26717 231 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 GBP2P32456 591 aaPredicted RBP11.49□□□□□ -0.57
CHMP6-203ENST00000572525 PHKA2P46019 1235 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 RAB27AP51159 221 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 NLRP11P59045 1033 aaKnown RBP11.49□□□□□ -0.57
CHMP6-203ENST00000572525 PRKCQQ04759 706 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 MIS18BP1Q6P0N0 1132 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 RALYLQ86SE5 291 aaKnown RBP11.49□□□□□ -0.57
CHMP6-203ENST00000572525 SMAP1Q8IYB5 467 aaPredicted RBP11.49□□□□□ -0.57
CHMP6-203ENST00000572525 ZNF654Q8IZM8 581 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 NCOA7Q8NI08 942 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 IGDCC4Q8TDY8 1250 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 VN1R3Q9BXE9 311 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 BCO2Q9BYV7 579 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 NRDE2Q9H7Z3 1164 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 SENP2Q9HC62 589 aa11.49□□□□□ -0.57
CHMP6-203ENST00000572525 TBC1D13Q9NVG8 400 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms