RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 GPT2Q8TD30 523 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 DHX38Q92620 1227 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 OSMRQ99650 979 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 NOC4LQ9BVI4 516 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 CELF4Q9BZC1 486 aaKnown RBP10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 GCOM2Q9BZD3 368 aaPredicted RBP10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 NUP62CLQ9H1M0 184 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 C17orf75Q9HAS0 396 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 KMT5AQ9NQR1 393 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 PANK4Q9NVE7 773 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 TBX21Q9UL17 535 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 CDY2AQ9Y6F7 541 aa10.44□□□□□ -0.74
NPLOC4-208ENST00000572351 A0A087WZ62 844 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 H0YCG3 227 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 KIAA0355O15063 1070 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 TRAK2O60296 914 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 RPN1P04843 607 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 PRR29P0C7W0 189 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 CYP2C18P33260 490 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 NAMPTP43490 491 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 CRYBB1P53674 252 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 CCL23P55773 120 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 PNOCQ13519 176 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 CAPSQ13938 189 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 TRIM71Q2Q1W2 868 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 UNC13DQ70J99 1090 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 SH3RF1Q7Z6J0 888 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 ZNF410Q86VK4 478 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 SFR1Q86XK3 245 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 DAW1Q8N136 415 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 BSNDQ8WZ55 320 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 SMARCE1Q969G3 411 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 SYAP1Q96A49 352 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 FDXACB1Q9BRP7 624 aaPredicted RBP10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 KIFC3Q9BVG8 833 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 C2orf40Q9H1Z8 148 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 CLSTN2Q9H4D0 955 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 MRPL44Q9H9J2 332 aaKnown RBP10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 EXOC1Q9NV70 894 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 RMND1Q9NWS8 449 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 NR2E3Q9Y5X4 410 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 MYH15Q9Y2K3 1946 aa10.43□□□□□ -0.74
NPLOC4-208ENST00000572351 UMODL1Q5DID0 1318 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 PVALEFA0A1B0GWK0 134 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 TRIM43BA6NCK2 446 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 INO80B-WBP1J3KQ70 363 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 K7ENM7 598 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 GPR32O75388 356 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 TIMP1P01033 207 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 CHRNA1P02708 482 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 IQCF3P0C7M6 154 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 SFPQP23246 707 aaKnown RBP eCLIP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 NPTX2P47972 431 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 ZNF131P52739 623 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 RBL2Q08999 1139 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 NCBP1Q09161 790 aaKnown RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 DPYDQ12882 1025 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 COASYQ13057 564 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 MAPK7Q13164 816 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 NFKBIBQ15653 356 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 SKOR2Q2VWA4 1001 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 CNNM4Q6P4Q7 775 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 STXBP4Q6ZWJ1 553 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 ELOA2Q8IYF1 753 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 TMEM199Q8N511 208 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 SLC17A8Q8NDX2 589 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 SPIRE2Q8WWL2 714 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 TRIM43Q96BQ3 446 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 DNAJC19Q96DA6 116 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 LBHD1Q9BQE6 289 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 INO80BQ9C086 356 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 TBC1D7Q9P0N9 293 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 SEL1LQ9UBV2 794 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 ZMYND8Q9ULU4 1186 aaPredicted RBP10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 DOCK5Q9H7D0 1870 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 FRMPD3Q5JV73 1810 aa10.42□□□□□ -0.74
NPLOC4-208ENST00000572351 CENPFP49454 3210 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 PHLPP2Q6ZVD8 1323 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 FRMD3A2A2Y4 597 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 DENND3A2RUS2 1198 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 SLC16A4O15374 487 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 RPS6KA5O75582 802 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 ERLIN2O94905 339 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 GCNT3O95395 438 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 PARNO95453 639 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 GHRP10912 638 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 DARSP14868 501 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 SYN1P17600 705 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 EIF4BP23588 611 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 EFNA5P52803 228 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 PTENP60484 403 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 MGAT3Q09327 533 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 NFX1Q12986 1120 aaKnown RBP10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 STRN3Q13033 797 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 PAK2Q13177 524 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 MAPK6Q16659 721 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 KMT5BQ4FZB7 885 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 FAM26DQ5JW98 314 aa10.41□□□□□ -0.74
NPLOC4-208ENST00000572351 FAM26FQ5R3K3 315 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms