RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 STAG3L1P0CL83 205 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 XRCC6P12956 609 aaKnown RBP eCLIP11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 ATF7P17544 494 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 GLRA2P23416 452 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 CCT6AP40227 531 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 GRIN1Q05586 938 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 BTG3Q14201 252 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 PDIA5Q14554 519 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 KCNK18Q7Z418 384 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 ECHDC2Q86YB7 292 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 ZNF710Q8N1W2 664 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 FIBCD1Q8N539 461 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 RNF149Q8NC42 400 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 FBXO22Q8NEZ5 403 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 CLP1Q92989 425 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 NACC1Q96RE7 527 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 ATP6V0A4Q9HBG4 840 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 C1orf112Q9NSG2 853 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 DBR1Q9UK59 544 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 LRFN2Q9ULH4 789 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 KIAA1024Q9UPX6 916 aa11.4□□□□□ -0.58
GTF3C1-213ENST00000571886 UNC80Q8N2C7 3258 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 TBKBP1A7MCY6 615 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 MEIS3P2A8K0S8 358 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 E9PMD0 336 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 DGAT1O75907 488 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 ZSCAN20P17040 1043 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 HOXA11P31270 313 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 BMPR1AP36894 532 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 PRPHP41219 470 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 PTENP60484 403 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 CDC42EP1Q00587 391 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 RESTQ13127 1097 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 GPM6BQ13491 265 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 CAPSQ13938 189 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 LONRF3Q496Y0 759 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 DTHD1Q6ZMT9 781 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 LRRC55Q6ZSA7 311 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 ZNF598Q86UK7 904 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 EXOC8Q8IYI6 725 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 CMTR2Q8IYT2 770 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 ERMNQ8TAM6 284 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 SNX29Q8TEQ0 813 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 TCP11Q8WWU5 503 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 BSNDQ8WZ55 320 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 INTS4Q96HW7 963 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 CASD1Q96PB1 797 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 PNMA5Q96PV4 448 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 PLIN2Q99541 437 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 POLR3FQ9H1D9 316 aaPredicted RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 DDX19AQ9NUU7 478 aaKnown RBP11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 TMEM161AQ9NX61 479 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 CLIC4Q9Y696 253 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 PRUNE2Q8WUY3 3088 aa11.39□□□□□ -0.59
GTF3C1-213ENST00000571886 PLXNA4Q9HCM2 1894 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 A0A0U1RQF3 1178 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 VWA3AA6NCI4 1184 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 H3BNC9 293 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 LAD1O00515 517 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 GRM6O15303 877 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 ASAP2O43150 1006 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 GAS2O43903 313 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 CYP11B2P19099 503 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 CTNNB1P35222 781 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 SF3A1Q15459 793 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 CLLU1OSQ5K130 101 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 UBXN11Q5T124 520 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 PADI6Q6TGC4 694 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 SRGAP1Q7Z6B7 1085 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 RNF169Q8NCN4 708 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 LRRC15Q8TF66 581 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 LPPQ93052 612 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 CPB2Q96IY4 423 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 BHMT2Q9H2M3 363 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 CWH43Q9H720 699 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 ELAC1Q9H777 363 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 AGPAT5Q9NUQ2 364 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 TYW1Q9NV66 732 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 REV3LO60673 3130 aa11.38□□□□□ -0.59
GTF3C1-213ENST00000571886 ARHGEF35A5YM69 484 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 TTLL13PA6NNM8 815 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 C5orf67F2Z3F1 127 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 GTPBP6O43824 516 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 CSPG5O95196 566 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 MUTP22033 750 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 SFPQP23246 707 aaKnown RBP eCLIP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 DNAJB1P25685 340 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 PHKA2P46019 1235 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 CAMK1Q14012 370 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 AMHR2Q16671 573 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 HAUS3Q68CZ6 603 aa11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 TWF2Q6IBS0 349 aaKnown RBP11.37□□□□□ -0.59
GTF3C1-213ENST00000571886 BRAPQ7Z569 592 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms