RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SPOUT1Q5T280 376 aaKnown RBP13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 EP400NLQ6ZTU2 488 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 P2RX5Q93086 422 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 ZNF668Q96K58 619 aaPredicted RBP13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 ATP6V0A4Q9HBG4 840 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 TMEM161AQ9NX61 479 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 NCOR1O75376 2440 aa13.87□□□□□ -0.19
CTDNEP1-205ENST00000570828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 EML1O00423 815 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 HOXA2O43364 376 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 NCK2O43639 380 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 JAK2O60674 1132 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 DARSP14868 501 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 FOSBP53539 338 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 CDC42EP1Q00587 391 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 DSC3Q14574 896 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 LEXMQ3ZCV2 418 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 EARS2Q5JPH6 523 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 PLA2G4FQ68DD2 849 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 SLFN12Q8IYM2 578 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 PPP2R3CQ969Q6 453 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 PABPC5Q96DU9 382 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 JPH2Q9BR39 696 aaPredicted RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 SH2D3AQ9BRG2 576 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 ELAC1Q9H777 363 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 ALG13Q9NP73 1137 aaKnown RBP13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 AAASQ9NRG9 546 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 PLAGL2Q9UPG8 496 aa13.86□□□□□ -0.19
CTDNEP1-205ENST00000570828 BRWD1Q9NSI6 2320 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 RALGAPA2Q2PPJ7 1873 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 MAFO75444 373 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 STBD1O95210 358 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 BAG4O95429 457 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 ITGB1P05556 798 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 P4HBP07237 508 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 FGFR1P11362 822 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 DRP2Q13474 957 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 FAM102BQ5T8I3 360 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 NCAPH2Q6IBW4 605 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 ANO5Q75V66 913 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 DIS3L2Q8IYB7 885 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 ABI1Q8IZP0 508 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 KLHL23Q8NBE8 558 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 SLC7A3Q8WY07 619 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 HAS1Q92839 578 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 CEP89Q96ST8 783 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 LXNQ9BS40 222 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 GCOM2Q9BZD3 368 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 CYP26B1Q9NR63 512 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 RYDENQ9NUL5 291 aaKnown RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 CLDND1Q9NY35 253 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 SUCLA2Q9P2R7 463 aaPredicted RBP13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 PPME1Q9Y570 386 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 PCDHB12Q9Y5F1 795 aa13.85□□□□□ -0.19
CTDNEP1-205ENST00000570828 IGKV6-21A0A0C4DH24 114 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 H3BQ06 376 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 PPP1R37O75864 691 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 SFPQP23246 707 aaKnown RBP eCLIP13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 FAM189BP81408 668 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 COL19A1Q14993 1142 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 EPHA7Q15375 998 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 PUS10Q3MIT2 529 aaKnown RBP13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 PTCRAQ6ISU1 281 aaPredicted RBP13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 ZNF410Q86VK4 478 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 RHPN2Q8IUC4 686 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 RNF169Q8NCN4 708 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 CEP170P1Q96L14 293 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 NLRP4Q96MN2 994 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 TMEM117Q9H0C3 514 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 DACT1Q9NYF0 836 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 LIMCH1Q9UPQ0 1083 aa13.84□□□□□ -0.19
CTDNEP1-205ENST00000570828 MYH9P35579 1960 aaKnown RBP13.83□□□□□ -0.19
CTDNEP1-205ENST00000570828 A0A087WZ62 844 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 BTBD18B2RXH4 712 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 NEMFO60524 1076 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 LAG3P18627 525 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 FGFR4P22455 802 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 YWHABP31946 246 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 RFC5P40937 340 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 POLGP54098 1239 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 CYP4A11Q02928 519 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 HYAL1Q12794 435 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 SAFBQ15424 915 aaKnown RBP eCLIP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 CALCRLQ16602 461 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 CSPP1Q1MSJ5 1256 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 OTUD6AQ7L8S5 288 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 ECHDC2Q86YB7 292 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 THNSL1Q8IYQ7 743 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 LRRC43Q8N309 656 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 SPPL3Q8TCT6 385 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 NEK9Q8TD19 979 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 POF1BQ8WVV4 589 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 FDXACB1Q9BRP7 624 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 INO80BQ9C086 356 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 ZSWIM4Q9H7M6 989 aa13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 TYW1Q9NV66 732 aaKnown RBP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 WRAP73Q9P2S5 460 aaPredicted RBP13.83□□□□□ -0.2
CTDNEP1-205ENST00000570828 FAM50BQ9Y247 325 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms