RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 CABS1Q96KC9 395 aa8.78□□□□□ -1
TCF4-246ENST00000570287 FERD3LQ96RJ6 166 aa8.78□□□□□ -1
TCF4-246ENST00000570287 LZTS2Q9BRK4 669 aa8.78□□□□□ -1
TCF4-246ENST00000570287 CD209Q9NNX6 404 aa8.78□□□□□ -1
TCF4-246ENST00000570287 MAD2L2Q9UI95 211 aa8.78□□□□□ -1
TCF4-246ENST00000570287 DMTF1Q9Y222 760 aa8.78□□□□□ -1
TCF4-246ENST00000570287 UBR3Q6ZT12 1888 aa8.78□□□□□ -1
TCF4-246ENST00000570287 TMEM232C9JQI7 657 aa8.77□□□□□ -1
TCF4-246ENST00000570287 MYCP01106 439 aaPredicted RBP8.77□□□□□ -1
TCF4-246ENST00000570287 ELF1P32519 619 aa8.77□□□□□ -1
TCF4-246ENST00000570287 MAGEA8P43361 318 aa8.77□□□□□ -1
TCF4-246ENST00000570287 LIG3P49916 1009 aa8.77□□□□□ -1
TCF4-246ENST00000570287 STAT4Q14765 748 aa8.77□□□□□ -1
TCF4-246ENST00000570287 GRIK5Q16478 980 aa8.77□□□□□ -1
TCF4-246ENST00000570287 POTEHQ6S545 545 aa8.77□□□□□ -1
TCF4-246ENST00000570287 NKD1Q969G9 470 aa8.77□□□□□ -1
TCF4-246ENST00000570287 EXOC2Q96KP1 924 aa8.77□□□□□ -1
TCF4-246ENST00000570287 MRPL44Q9H9J2 332 aaKnown RBP8.77□□□□□ -1
TCF4-246ENST00000570287 GGA1Q9UJY5 639 aa8.77□□□□□ -1
TCF4-246ENST00000570287 HPCAL4Q9UM19 191 aa8.77□□□□□ -1
TCF4-246ENST00000570287 GPR75-ASB3A0A0A6YYF3 556 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 BBOX1O75936 387 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 UFL1O94874 794 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 VDRP11473 427 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 GYS1P13807 737 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 VEGFAP15692 232 aaPredicted RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 LONP1P36776 959 aaKnown RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 AFMP43652 599 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 IFT88Q13099 833 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 CAMK2GQ13555 558 aaPredicted RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 WHAMMP3Q1A5X7 153 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 SNAP47Q5SQN1 464 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 SPATA1Q5VX52 437 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 SPECC1LQ69YQ0 1117 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 DAGLBQ8NCG7 672 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 PPHLN1Q8NEY8 458 aaKnown RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 CCDC148Q8NFR7 591 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 GPKOWQ92917 476 aaPredicted RBP eCLIP8.77□□□□□ -1.01
TCF4-246ENST00000570287 FAM163AQ96GL9 167 aaPredicted RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 MED15Q96RN5 788 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 TMPRSS4Q9NRS4 437 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 GTF2IRD1Q9UHL9 959 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 BAZ2BQ9UIF8 2168 aaKnown RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 ERVH48-1M5A8F1 160 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 EBAG9O00559 213 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 SERPINB2P05120 415 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 MCM7P33993 719 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 BTDP43251 543 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 IRAK1P51617 712 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 CUL4BQ13620 913 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 TRIP4Q15650 581 aaPredicted RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 SEPT7Q16181 437 aaKnown RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 KIF4BQ2VIQ3 1234 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 PKN3Q6P5Z2 889 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 GBP6Q6ZN66 633 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 YTHDF3Q7Z739 585 aaKnown RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 SLC51AQ86UW1 340 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 LSRQ86X29 649 aaPredicted RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 MAPKAPK5Q8IW41 473 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 TRMT44Q8IYL2 757 aaKnown RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 STAG2Q8N3U4 1231 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 IGSF22Q8N9C0 903 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 ZKSCAN4Q969J2 545 aaPredicted RBP8.77□□□□□ -1.01
TCF4-246ENST00000570287 CDK5RAP2Q96SN8 1893 aa8.77□□□□□ -1.01
TCF4-246ENST00000570287 GCFC2P16383 781 aaKnown RBP8.76□□□□□ -1.01
TCF4-246ENST00000570287 HOXA10P31260 410 aaPredicted RBP8.76□□□□□ -1.01
TCF4-246ENST00000570287 CCNFP41002 786 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 NR1I3Q14994 352 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 PCBP1Q15365 356 aaKnown RBP eCLIP8.76□□□□□ -1.01
TCF4-246ENST00000570287 ATP13A4Q4VNC1 1196 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 C4orf32Q8N8J7 132 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 TMEM47Q9BQJ4 181 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 SAMSN1Q9NSI8 373 aaKnown RBP8.76□□□□□ -1.01
TCF4-246ENST00000570287 DDX60LQ5H9U9 1706 aaKnown RBP8.76□□□□□ -1.01
TCF4-246ENST00000570287 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 DGKGP49619 791 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 IL17AQ16552 155 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 SLC27A3Q5K4L6 730 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 SPATS2Q86XZ4 545 aaKnown RBP8.76□□□□□ -1.01
TCF4-246ENST00000570287 TEX11Q8IYF3 940 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 GLIS3Q8NEA6 775 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 PANX2Q96RD6 677 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 BARHL2Q9NY43 387 aa8.76□□□□□ -1.01
TCF4-246ENST00000570287 CHUKO15111 745 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 EIF3HO15372 352 aaKnown RBP eCLIP8.75□□□□□ -1.01
TCF4-246ENST00000570287 PHACTR2O75167 634 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 RTN2O75298 545 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CCDC175P0C221 793 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 INPP5BP32019 993 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CCT5P48643 541 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 PSEN2P49810 448 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 PURAQ00577 322 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 GOLGA8FQ08AF8 430 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 GOLGA8DPQ0D2H9 430 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 ZNF460Q14592 562 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 CRYMQ14894 314 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 FXNQ16595 210 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 PTPN21Q16825 1174 aa8.75□□□□□ -1.01
TCF4-246ENST00000570287 MEX3CQ5U5Q3 659 aaKnown RBP8.75□□□□□ -1.01
TCF4-246ENST00000570287 ASTLQ6HA08 431 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms