RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 IFT122Q9HBG6 1241 aa14.53□□□□□ -0.08
CNOT1-220ENST00000569916 TMEM161AQ9NX61 479 aa14.53□□□□□ -0.08
CNOT1-220ENST00000569916 LMCD1Q9NZU5 365 aa14.53□□□□□ -0.08
CNOT1-220ENST00000569916 RWDD3Q9Y3V2 267 aa14.53□□□□□ -0.08
CNOT1-220ENST00000569916 PCDHB7Q9Y5E2 793 aa14.53□□□□□ -0.08
CNOT1-220ENST00000569916 MRPL42Q9Y6G3 142 aaKnown RBP14.53□□□□□ -0.08
CNOT1-220ENST00000569916 H3BNC9 293 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 LAD1O00515 517 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 DGAT1O75907 488 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 XRCC6P12956 609 aaKnown RBP eCLIP14.52□□□□□ -0.09
CNOT1-220ENST00000569916 ZSCAN20P17040 1043 aaPredicted RBP14.52□□□□□ -0.09
CNOT1-220ENST00000569916 BMPR1AP36894 532 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 LAMTOR4Q0VGL1 99 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 PAN2Q504Q3 1202 aaKnown RBP14.52□□□□□ -0.09
CNOT1-220ENST00000569916 HAUS3Q68CZ6 603 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 FERMT3Q86UX7 667 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 IGSF22Q8N9C0 903 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 ERMNQ8TAM6 284 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 CCDC43Q96MW1 224 aaKnown RBP14.52□□□□□ -0.09
CNOT1-220ENST00000569916 INO80BQ9C086 356 aaPredicted RBP14.52□□□□□ -0.09
CNOT1-220ENST00000569916 MYH15Q9Y2K3 1946 aa14.52□□□□□ -0.09
CNOT1-220ENST00000569916 USO1O60763 962 aaKnown RBP14.51□□□□□ -0.09
CNOT1-220ENST00000569916 SRGAP2CP0DJJ0 459 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 FGFR1P11362 822 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 MUTP22033 750 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 PRPHP41219 470 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 ATP2C1P98194 919 aaPredicted RBP14.51□□□□□ -0.09
CNOT1-220ENST00000569916 GPM6BQ13491 265 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 IL17AQ16552 155 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 ECM1Q16610 540 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 FAM102BQ5T8I3 360 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 ECHDC2Q86YB7 292 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 ASAP3Q8TDY4 903 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 NACC1Q96RE7 527 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 MINDY3Q9H8M7 445 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 CHST12Q9NRB3 414 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 RNF19AQ9NV58 838 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 LRWD1Q9UFC0 647 aa14.51□□□□□ -0.09
CNOT1-220ENST00000569916 DBR1Q9UK59 544 aaKnown RBP14.51□□□□□ -0.09
CNOT1-220ENST00000569916 A0A0U1RQF3 1178 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 TBKBP1A7MCY6 615 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 ASAP2O43150 1006 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 RB1P06400 928 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 ATF7P17544 494 aaPredicted RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 ARL2P36404 184 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 CCT6AP40227 531 aaKnown RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 CAPSQ13938 189 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 PDIA5Q14554 519 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 MXD4Q14582 209 aaPredicted RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 CATSPER4Q7RTX7 472 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 SRGAP1Q7Z6B7 1085 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 ZNF598Q86UK7 904 aaKnown RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 RNF149Q8NC42 400 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 MRPL38Q96DV4 380 aaKnown RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 C11orf84Q9BUA3 381 aaPredicted RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 AGPAT5Q9NUQ2 364 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 DACT1Q9NYF0 836 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 THEGQ9P2T0 379 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 HCSTQ9UBK5 93 aa14.5□□□□□ -0.09
CNOT1-220ENST00000569916 PIN4Q9Y237 131 aaKnown RBP14.5□□□□□ -0.09
CNOT1-220ENST00000569916 PP2D1A8MPX8 630 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 K7ELQ4 463 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-220ENST00000569916 GLRA2P23416 452 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 HOXD11P31277 338 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-220ENST00000569916 PHKA2P46019 1235 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 DTHD1Q6ZMT9 781 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 IFNLR1Q8IU57 520 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-220ENST00000569916 SNX29Q8TEQ0 813 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 P2RX5Q93086 422 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 INTS4Q96HW7 963 aaKnown RBP14.49□□□□□ -0.09
CNOT1-220ENST00000569916 TRAIPQ9BWF2 469 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 PLVAPQ9BX97 442 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 RAB34Q9BZG1 259 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 TMEM117Q9H0C3 514 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 POLR3FQ9H1D9 316 aaPredicted RBP14.49□□□□□ -0.09
CNOT1-220ENST00000569916 GPRC5CQ9NQ84 441 aa14.49□□□□□ -0.09
CNOT1-220ENST00000569916 VPS37CA5D8V6 355 aaPredicted RBP14.48□□□□□ -0.09
CNOT1-220ENST00000569916 ARHGEF35A5YM69 484 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 GRM6O15303 877 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 HOXA2O43364 376 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 PTENP60484 403 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 POU5F1BQ06416 359 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 TFDP1Q14186 410 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 PTPROQ16827 1216 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 CLLU1OSQ5K130 101 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 TWF2Q6IBS0 349 aaKnown RBP14.48□□□□□ -0.09
CNOT1-220ENST00000569916 BRAPQ7Z569 592 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 RNF169Q8NCN4 708 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 MCPH1Q8NEM0 835 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 CASD1Q96PB1 797 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 MMTAG2Q9BU76 263 aaKnown RBP14.48□□□□□ -0.09
CNOT1-220ENST00000569916 LMAN2LQ9H0V9 348 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 CWH43Q9H720 699 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 KIAA1024Q9UPX6 916 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 STK24Q9Y6E0 443 aa14.48□□□□□ -0.09
CNOT1-220ENST00000569916 EOMESO95936 686 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 ITGB1P05556 798 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 PDCP20941 246 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 CDC25AP30304 524 aa14.47□□□□□ -0.09
CNOT1-220ENST00000569916 HOXA11P31270 313 aaPredicted RBP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms