RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SFI1A8K8P3 1242 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 WDR64B1ANS9 1081 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SPATA31C2B4DYI2 1134 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 P4HA2O15460 535 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CHMP2AO43633 222 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 PPP1R12BO60237 982 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ATP9AO75110 1047 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 HIP1RO75146 1068 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 TACC1O75410 805 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 USP2O75604 605 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 GABBR2O75899 941 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 GFPT2O94808 682 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 STBD1O95210 358 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ZRANB2O95218 330 aaKnown RBP eCLIP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 GCNT3O95395 438 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 NR3C2P08235 984 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 PLEKP08567 350 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 PLS3P13797 630 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SCP2P22307 547 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CCND2P30279 289 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 NMT1P30419 496 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 EPS15P42566 896 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 RARRES1P49788 294 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 KIF11P52732 1056 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 JAM2P57087 298 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 RTP1P59025 263 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CHMP4BP1P59074 171 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 POLR2FP61218 127 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 PSMC5P62195 406 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 UBXN2AP68543 259 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 GTF2BQ00403 316 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CYP27A1Q02318 531 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ITIH3Q06033 890 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 MTMR1Q13613 665 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 BAATQ14032 418 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 BMS1Q14692 1282 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 TMEM132BQ14DG7 1078 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 BRD3Q15059 726 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 EXOC3L4Q17RC7 722 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ODR4Q5SWX8 454 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ARHGEF16Q5VV41 709 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SLC30A10Q6XR72 485 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 HS2ST1Q7LGA3 356 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ZNF572Q7Z3I7 529 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 NLRX1Q86UT6 975 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 FMNL3Q8IVF7 1028 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SMAP1Q8IYB5 467 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 MSL3Q8N5Y2 521 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CCDC155Q8N6L0 562 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 MSANTD4Q8NCY6 345 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 TRIM58Q8NG06 486 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 NSUN6Q8TEA1 469 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 UBE2Q2Q8WVN8 375 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ZKSCAN4Q969J2 545 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ATG4CQ96DT6 458 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CDHR1Q96JP9 859 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 INPP4AQ96PE3 977 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 LSM14BQ9BX40 385 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 MOV10L1Q9BXT6 1211 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 PARD6BQ9BYG5 372 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 IFIH1Q9BYX4 1025 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 GBP3Q9H0R5 595 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 BCAS3Q9H6U6 928 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 C17orf75Q9HAS0 396 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SIX2Q9NPC8 291 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 LUC7LQ9NQ29 371 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 PDLIM7Q9NR12 457 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ADARB2Q9NS39 739 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 RNF146Q9NTX7 359 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ARGLU1Q9NWB6 273 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 TMOD4Q9NZQ9 345 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 LARSQ9P2J5 1176 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 ZNF214Q9UL59 606 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 GUCA1BQ9UMX6 200 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SCAF8Q9UPN6 1271 aaKnown RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 JRKLQ9Y4A0 524 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 RIPK3Q9Y572 518 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 MAFBQ9Y5Q3 323 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SAR1BQ9Y6B6 198 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 V9GYY5 206 aaPredicted RBP5.89□□□□□ -1.47
SF3B3-213ENST00000569687 NFASCO94856 1347 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 SMCHD1A6NHR9 2005 aa5.89□□□□□ -1.47
SF3B3-213ENST00000569687 CTAGE15A4D2H0 777 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CCDC151A5D8V7 595 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CFAP99D6REC4 459 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 SMAPO00193 183 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CXCL11O14625 94 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 EIF3JO75822 258 aaKnown RBP5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CCNE2O96020 404 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CTAGE8P0CG41 777 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 UCHL3P15374 230 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ZSCAN20P17040 1043 aaPredicted RBP5.88□□□□□ -1.47
SF3B3-213ENST00000569687 SLC9A1P19634 815 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 YWHABP31946 246 aaKnown RBP5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ICAM3P32942 547 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 ABCD1P33897 745 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 CASP4P49662 377 aa5.88□□□□□ -1.47
SF3B3-213ENST00000569687 NAB2Q15742 525 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms