RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 FAM43BQ6ZT52 329 aaPredicted RBP15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 TMEM173Q86WV6 379 aaPredicted RBP15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 RNF169Q8NCN4 708 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 SMRP1Q8NCR6 262 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 HELQQ8TDG4 1101 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 NLRP7Q8WX94 980 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 LPPQ93052 612 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 TLR9Q9NR96 1032 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 ORC3Q9UBD5 711 aaPredicted RBP15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 PRKAG3Q9UGI9 489 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 PCDHB12Q9Y5F1 795 aa15.55■□□□□ 0.08
GTF3C1-211ENST00000569653 HIDE1A8MVS5 230 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 CDKL5O76039 1030 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 LAG3P18627 525 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 NDUFV1P49821 464 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 ANAPC15P60006 121 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 PSMC5P62195 406 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 UBE3AQ05086 875 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 DUSP6Q16828 381 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 KCNT2Q6UVM3 1135 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 THNSL1Q8IYQ7 743 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 NSUN7Q8NE18 718 aaKnown RBP15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 TLE6Q9H808 572 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 MINDY3Q9H8M7 445 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 IFT122Q9HBG6 1241 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 CYP26B1Q9NR63 512 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 BMP2KQ9NSY1 1161 aaPredicted RBP15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 RGL1Q9NZL6 768 aa15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 SUCLA2Q9P2R7 463 aaPredicted RBP15.54■□□□□ 0.08
GTF3C1-211ENST00000569653 CCNT1O60563 726 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 EIF5BO60841 1220 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 PHKA2P46019 1235 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 QARSP47897 775 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 FOSBP53539 338 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 PLCB3Q01970 1234 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 COASYQ13057 564 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 LONRF3Q496Y0 759 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 PLPP4Q5VZY2 271 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 RHPN2Q8IUC4 686 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 SLC39A11Q8N1S5 342 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 LRRC43Q8N309 656 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 BCL7CQ8WUZ0 217 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 MRPS27Q92552 414 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 FAM20AQ96MK3 541 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 SCLT1Q96NL6 688 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 DHX33Q9H6R0 707 aaKnown RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 CDH22Q9UJ99 828 aa15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 USP15Q9Y4E8 981 aaPredicted RBP15.53■□□□□ 0.08
GTF3C1-211ENST00000569653 DCXO43602 365 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 GCFC2P16383 781 aaKnown RBP15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 ZSCAN20P17040 1043 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 AFF1P51825 1210 aaKnown RBP15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 ZNF710Q8N1W2 664 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 FEZF2Q8TBJ5 459 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 TMEM143Q96AN5 459 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 DYDC2Q96IM9 177 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 NLRP4Q96MN2 994 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 LXNQ9BS40 222 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 GCOM2Q9BZD3 368 aaPredicted RBP15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 XPNPEP1Q9NQW7 623 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 AAASQ9NRG9 546 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 MUTYHQ9UIF7 546 aa15.52■□□□□ 0.08
GTF3C1-211ENST00000569653 NT5C1B-RDH14C9J2C7 533 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 TBX3O15119 743 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 PLA2G5P39877 138 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 CYP4A11Q02928 519 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 CTTNQ14247 550 aaKnown RBP15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 EPHA7Q15375 998 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 NCAPH2Q6IBW4 605 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 SYCE2Q6PIF2 218 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 ZNF410Q86VK4 478 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 RNF135Q8IUD6 432 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 MICAL1Q8TDZ2 1067 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 SUSD6Q92537 303 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 ZNF558Q96NG5 402 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 TCF25Q9BQ70 676 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 TRAIPQ9BWF2 469 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 VN1R3Q9BXE9 311 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 LZTS1Q9Y250 596 aa15.51■□□□□ 0.07
GTF3C1-211ENST00000569653 BTBD18B2RXH4 712 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 LOC730098B7Z3J9 87 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 HOXA2O43364 376 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 EOMESO95936 686 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 P4HBP07237 508 aaKnown RBP15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 HOXA11P31270 313 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 KRT2P35908 639 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 CSPP1Q1MSJ5 1256 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 C4orf19Q8IY42 314 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 PRPF31Q8WWY3 499 aaKnown RBP15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 CEP170P1Q96L14 293 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 S1PR5Q9H228 398 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 AGPAT5Q9NUQ2 364 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 FAM105AQ9NUU6 356 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 RNF216Q9NWF9 866 aaPredicted RBP15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 SPG21Q9NZD8 308 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 FAM50BQ9Y247 325 aa15.5■□□□□ 0.07
GTF3C1-211ENST00000569653 COL4A3BPQ9Y5P4 624 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms