RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 RHPN2Q8IUC4 686 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 MYCT1Q8N699 235 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 SMARCE1Q969G3 411 aa25.92■■□□□ 1.74
RAB40C-212ENST00000569575 FAM49AQ9H0Q0 323 aaPredicted RBP25.92■■□□□ 1.74
RAB40C-212ENST00000569575 TRAK2O60296 914 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 RPN1P04843 607 aaKnown RBP25.91■■□□□ 1.74
RAB40C-212ENST00000569575 THPOP40225 353 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 PHKA2P46019 1235 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 GPC3P51654 580 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 HERC4Q5GLZ8 1057 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-212ENST00000569575 CCDC183Q5T5S1 534 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 MAEAQ7L5Y9 396 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 TRIML1Q8N9V2 468 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 CELF4Q9BZC1 486 aaKnown RBP25.91■■□□□ 1.74
RAB40C-212ENST00000569575 GCOM2Q9BZD3 368 aaPredicted RBP25.91■■□□□ 1.74
RAB40C-212ENST00000569575 TMEM39AQ9NV64 488 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 TBX21Q9UL17 535 aa25.91■■□□□ 1.74
RAB40C-212ENST00000569575 KIAA0355O15063 1070 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 GPR32O75388 356 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 RHOBTB3O94955 611 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 SELPP16109 830 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 SARSP49591 514 aaKnown RBP25.9■■□□□ 1.74
RAB40C-212ENST00000569575 NLRP11P59045 1033 aaKnown RBP25.9■■□□□ 1.74
RAB40C-212ENST00000569575 EHHADHQ08426 723 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 RAD51AP2Q09MP3 1159 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 DRP2Q13474 957 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 FAM178BQ8IXR5 827 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 PPP1R13LQ8WUF5 828 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 HVCN1Q96D96 273 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 BLZF1Q9H2G9 400 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 GPRC5CQ9NQ84 441 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 EXOC1Q9NV70 894 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 KIAA1468Q9P260 1216 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 TRPV2Q9Y5S1 764 aa25.9■■□□□ 1.74
RAB40C-212ENST00000569575 NPHP3-ACAD11A0A0J9YXS1 232 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 KIF20AO95235 890 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 CKBP12277 381 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 NPTX2P47972 431 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 PTENP60484 403 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 PNOCQ13519 176 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 ZBTB8OSQ8IWT0 167 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 RNF149Q8NC42 400 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 DEPTORQ8TB45 409 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 DHX38Q92620 1227 aaKnown RBP25.89■■□□□ 1.74
RAB40C-212ENST00000569575 NOC4LQ9BVI4 516 aaKnown RBP25.89■■□□□ 1.74
RAB40C-212ENST00000569575 ADAMTS10Q9H324 1103 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 ZHX3Q9H4I2 956 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 TMEM134Q9H6X4 195 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 KMT5AQ9NQR1 393 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 PRKAG2Q9UGJ0 569 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 PCDHB13Q9Y5F0 798 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 PCDHA5Q9Y5H7 936 aa25.89■■□□□ 1.74
RAB40C-212ENST00000569575 RSPH10B2B2RC85 870 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 KLRC4O43908 158 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 VTNP04004 478 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 RSPH10BP0C881 870 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 PPP1R2P41236 205 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 NCKAP1LP55160 1127 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 PEX3P56589 373 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 COASYQ13057 564 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 CDCA2Q69YH5 1023 aaPredicted RBP25.88■■□□□ 1.73
RAB40C-212ENST00000569575 RBM43Q6ZSC3 357 aaKnown RBP25.88■■□□□ 1.73
RAB40C-212ENST00000569575 GRAMD1CQ8IYS0 662 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 ASAP3Q8TDY4 903 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 NLRP7Q8WX94 980 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 HIPK3Q9H422 1215 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 ARHGAP28Q9P2N2 729 aa25.88■■□□□ 1.73
RAB40C-212ENST00000569575 CCDC169A6NNP5 214 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 EIF4BP23588 611 aaKnown RBP25.87■■□□□ 1.73
RAB40C-212ENST00000569575 RFC2P35250 354 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 MGAT3Q09327 533 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 CAPSQ13938 189 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 KMT5BQ4FZB7 885 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 FAM26FQ5R3K3 315 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 ZNF720Q7Z2F6 126 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 PRIMPOLQ96LW4 560 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 SCLT1Q96NL6 688 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 IFT122Q9HBG6 1241 aa25.87■■□□□ 1.73
RAB40C-212ENST00000569575 LRRIQ4A6NIV6 560 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 SFI1A8K8P3 1242 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 SRGAP2CP0DJJ0 459 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 NCBP1Q09161 790 aaKnown RBP25.86■■□□□ 1.73
RAB40C-212ENST00000569575 CAMK4Q16566 473 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 FAM187BQ17R55 369 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 LRRC8DQ7L1W4 858 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 SFR1Q86XK3 245 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 ZBTB10Q96DT7 871 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 NLRP4Q96MN2 994 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 MRPL44Q9H9J2 332 aaKnown RBP25.86■■□□□ 1.73
RAB40C-212ENST00000569575 CDY2AQ9Y6F7 541 aa25.86■■□□□ 1.73
RAB40C-212ENST00000569575 A0A087WZ62 844 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 K7ERI5 159 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 EIF3DO15371 548 aaKnown RBP eCLIP25.85■■□□□ 1.73
RAB40C-212ENST00000569575 EVI5O60447 810 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 TIMP1P01033 207 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 CHRNA1P02708 482 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 PRR29P0C7W0 189 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 DARSP14868 501 aaKnown RBP25.85■■□□□ 1.73
RAB40C-212ENST00000569575 GTF2BQ00403 316 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 CACNB1Q02641 598 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms