RNA–Protein interactions for RNA: ENST00000569336.2

CLN6-209, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-209ENST00000569336 PIGOQ8TEQ8 1089 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 LINC01599Q8WXQ3 324 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 MYLIPQ8WY64 445 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 CDK5RAP3Q96JB5 506 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 AK8Q96MA6 479 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 TGS1Q96RS0 853 aaKnown RBP10.92□□□□□ -0.66
CLN6-209ENST00000569336 ADAM2Q99965 735 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 FDXACB1Q9BRP7 624 aaPredicted RBP10.92□□□□□ -0.66
CLN6-209ENST00000569336 NT5C3AQ9H0P0 336 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 ZSCAN16Q9H4T2 348 aaPredicted RBP10.92□□□□□ -0.66
CLN6-209ENST00000569336 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 RGS18Q9NS28 235 aa10.92□□□□□ -0.66
CLN6-209ENST00000569336 BMP2KQ9NSY1 1161 aaPredicted RBP10.92□□□□□ -0.66
CLN6-209ENST00000569336 C5orf42Q9H799 3197 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 TCF20Q9UGU0 1960 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 LCHNA4D1U4 455 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 LINC01553A4QN01 128 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 VWA3AA6NCI4 1184 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 HOXA2O43364 376 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 USO1O60763 962 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 ERLIN2O94905 339 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 SRGAP1Q7Z6B7 1085 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 CMTR2Q8IYT2 770 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 FIBCD1Q8N539 461 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 ZNF579Q8NAF0 562 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 PRPF31Q8WWY3 499 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 RSPH1Q8WYR4 309 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 TMEM143Q96AN5 459 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 TMX1Q9H3N1 280 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 PRDM12Q9H4Q4 367 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 ELAC1Q9H777 363 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 CHST12Q9NRB3 414 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
CLN6-209ENST00000569336 DDX19AQ9NUU7 478 aaKnown RBP10.91□□□□□ -0.66
CLN6-209ENST00000569336 BDP1A6H8Y1 2624 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 ZBTB39O15060 712 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 GTPBP6O43824 516 aaPredicted RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 MGEA5O60502 916 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 DGKIO75912 1065 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 SKIP12755 728 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 RAB27AP51159 221 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 ERVK-21P61565 698 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 POU5F1BQ06416 359 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 NCBP1Q09161 790 aaKnown RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 RESTQ13127 1097 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 BTG3Q14201 252 aaPredicted RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 PPP2R5AQ15172 486 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 SF3A1Q15459 793 aaKnown RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 CATSPER4Q7RTX7 472 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 RNF149Q8NC42 400 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 ARNTL2Q8WYA1 636 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 ZNF668Q96K58 619 aaPredicted RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 NFKBIZQ9BYH8 718 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 RC3H2Q9HBD1 1191 aaKnown RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 IFT122Q9HBG6 1241 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 XPNPEP1Q9NQW7 623 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 AGPAT5Q9NUQ2 364 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 TMEM161AQ9NX61 479 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 KIAA1024Q9UPX6 916 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 DNM3Q9UQ16 869 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 MTMR6Q9Y217 621 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 PIN4Q9Y237 131 aaKnown RBP10.9□□□□□ -0.66
CLN6-209ENST00000569336 PCDHB7Q9Y5E2 793 aa10.9□□□□□ -0.66
CLN6-209ENST00000569336 VCANP13611 3396 aa10.9□□□□□ -0.67
CLN6-209ENST00000569336 C9IYK1 514 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 SRGAP2CP0DJJ0 459 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 HOXD11P31277 338 aaPredicted RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 LONP1P36776 959 aaKnown RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 DSC3Q14574 896 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 TWF2Q6IBS0 349 aaKnown RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 PADI6Q6TGC4 694 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 RTN4RL1Q86UN2 441 aaPredicted RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 IFNLR1Q8IU57 520 aaPredicted RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 KSR1Q8IVT5 923 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 ZBTB8OSQ8IWT0 167 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 ABI1Q8IZP0 508 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 FBXO22Q8NEZ5 403 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 RASSF8Q8NHQ8 419 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 KIFAP3Q92845 792 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 ZNF689Q96CS4 500 aaPredicted RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 CALML4Q96GE6 196 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 TRAIPQ9BWF2 469 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 POLR3FQ9H1D9 316 aaPredicted RBP10.89□□□□□ -0.67
CLN6-209ENST00000569336 C2orf40Q9H1Z8 148 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 BHMT2Q9H2M3 363 aa10.89□□□□□ -0.67
CLN6-209ENST00000569336 PHLPP2Q6ZVD8 1323 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 A0A0U1RQF3 1178 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 PP2D1A8MPX8 630 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 EYA4O95677 639 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 EOMESO95936 686 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 CYP11B2P19099 503 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 IBSPP21815 317 aaPredicted RBP10.88□□□□□ -0.67
CLN6-209ENST00000569336 AXLP30530 894 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 CTNNB1P35222 781 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 ARL2P36404 184 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 TXLNAP40222 546 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 UBA7P41226 1012 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 PTENP60484 403 aa10.88□□□□□ -0.67
CLN6-209ENST00000569336 CAPSQ13938 189 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms