RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 DNAJB1P25685 340 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 HOXC8P31273 242 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 SLC16A2P36021 539 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 NOVP48745 357 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 BTG3Q14201 252 aaPredicted RBP6.88□□□□□ -1.31
CDH13-212ENST00000569144 PUM1Q14671 1186 aaKnown RBP eCLIP6.88□□□□□ -1.31
CDH13-212ENST00000569144 STXBP2Q15833 593 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 TTBK2Q6IQ55 1244 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 ITPRIPQ8IWB1 547 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 UBALD2Q8IYN6 164 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 IFNL3Q8IZI9 196 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 SPPL3Q8TCT6 385 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 APPBP2Q92624 585 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 ATP6V0A1Q93050 837 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 OSBP2Q969R2 916 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 OSBPL7Q9BZF2 842 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 MAF1Q9H063 256 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 ANO2Q9NQ90 1003 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 IL17RBQ9NRM6 502 aa6.88□□□□□ -1.31
CDH13-212ENST00000569144 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.88□□□□□ -1.31
CDH13-212ENST00000569144 DNAH14Q0VDD8 3507 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 PTPRZ1P23471 2315 aaPredicted RBP6.87□□□□□ -1.31
CDH13-212ENST00000569144 TSPY2A6NKD2 308 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 PATL2C9JE40 543 aaKnown RBP6.87□□□□□ -1.31
CDH13-212ENST00000569144 RAB11FIP3O75154 756 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 PPFIA4O75335 1185 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 APPP05067 770 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 ITGB1P05556 798 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 NFKB1P19838 968 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 AMPD1P23109 780 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 MPSTP25325 297 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 CLCN5P51795 746 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 MARSP56192 900 aaKnown RBP6.87□□□□□ -1.31
CDH13-212ENST00000569144 PPARAQ07869 468 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 TBC1D8BQ0IIM8 1120 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 ZNF211Q13398 564 aaPredicted RBP6.87□□□□□ -1.31
CDH13-212ENST00000569144 ATCAYQ86WG3 371 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 FTSJ3Q8IY81 847 aaKnown RBP6.87□□□□□ -1.31
CDH13-212ENST00000569144 KREMEN2Q8NCW0 462 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 GPR152Q8TDT2 470 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 NSUN6Q8TEA1 469 aaKnown RBP6.87□□□□□ -1.31
CDH13-212ENST00000569144 ATP8B4Q8TF62 1192 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 POF1BQ8WVV4 589 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 PIK3R5Q8WYR1 880 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 NEK1Q96PY6 1258 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 IWS1Q96ST2 819 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 NACAP1Q9BZK3 213 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 FAM13BQ9NYF5 915 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 SORCS3Q9UPU3 1222 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.87□□□□□ -1.31
CDH13-212ENST00000569144 PCDHGC5Q9Y5F6 944 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 MRVI1Q9Y6F6 885 aa6.87□□□□□ -1.31
CDH13-212ENST00000569144 FRMPD2Q68DX3 1309 aaPredicted RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 ELOA3CA0A087WX78 387 aaPredicted RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 ELOA3DA6NLF2 546 aaPredicted RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 M0R2C6 588 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 RNF113AO15541 343 aaKnown RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 TREHO43280 583 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 NMT2O60551 498 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 XYLBO75191 536 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 EIF3JO75822 258 aaKnown RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 DGKIO75912 1065 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 SASH3O75995 380 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 BRD1O95696 1058 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 SRGAP2BP0DMP2 458 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 SERPINB4P48594 390 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 HSDL1Q3SXM5 330 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 ELOA3BQ3SY89 546 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 RBM23Q86U06 439 aaKnown RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 CMTR2Q8IYT2 770 aaKnown RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 KBTBD3Q8NAB2 608 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 KLHL23Q8NBE8 558 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 ELOA3Q8NG57 546 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 SYTL5Q8TDW5 730 aaPredicted RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 TAAR1Q96RJ0 339 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 CDCA3Q99618 268 aaPredicted RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 C16orf70Q9BSU1 422 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 BCL11AQ9H165 835 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 SEMA4AQ9H3S1 761 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 TLE6Q9H808 572 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 NR2E1Q9Y466 385 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 MRPL42Q9Y6G3 142 aaKnown RBP6.86□□□□□ -1.31
CDH13-212ENST00000569144 MYH7P12883 1935 aa6.86□□□□□ -1.31
CDH13-212ENST00000569144 VPS13AQ96RL7 3174 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
CDH13-212ENST00000569144 FAM186AA6NE01 2351 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 H3BRB1 525 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 ENPP3O14638 875 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 LMNAP02545 664 aaKnown RBP6.85□□□□□ -1.31
CDH13-212ENST00000569144 ZFYP08048 801 aaPredicted RBP6.85□□□□□ -1.31
CDH13-212ENST00000569144 SMIM10L2AP0DMW4 78 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 SMIM10L2BP0DMW5 78 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 GNAT1P11488 350 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 RLBP1P12271 317 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 TARSP26639 723 aaKnown RBP6.85□□□□□ -1.31
CDH13-212ENST00000569144 EIF1AXP47813 144 aaKnown RBP6.85□□□□□ -1.31
CDH13-212ENST00000569144 UBE3AQ05086 875 aa6.85□□□□□ -1.31
CDH13-212ENST00000569144 TRIP4Q15650 581 aaPredicted RBP6.85□□□□□ -1.31
CDH13-212ENST00000569144 DUSP6Q16828 381 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms