RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ARHGAP20Q9P2F6 1191 aa7.37□□□□□ -1.23
UBR1-208ENST00000569066 A0A0A6YYK5 440 aaPredicted RBP7.36□□□□□ -1.23
UBR1-208ENST00000569066 MYL3P08590 195 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 VCAM1P19320 739 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 HLTFQ14527 1009 aaKnown RBP eCLIP7.36□□□□□ -1.23
UBR1-208ENST00000569066 BRD3Q15059 726 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 MVB12AQ96EY5 273 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 SOX7Q9BT81 388 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 WNT8AQ9H1J5 351 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 HYAL3O43820 417 aaPredicted RBP7.36□□□□□ -1.23
UBR1-208ENST00000569066 GP2P55259 537 aaKnown RBP7.36□□□□□ -1.23
UBR1-208ENST00000569066 ITGA1P56199 1179 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 ADAM9Q13443 819 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 IL10RAQ13651 578 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 PGS1Q32NB8 556 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 ZC3H18Q86VM9 953 aaKnown RBP7.36□□□□□ -1.23
UBR1-208ENST00000569066 FAM156AQ8NDB6 213 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 RPGRQ92834 1020 aaKnown RBP7.36□□□□□ -1.23
UBR1-208ENST00000569066 KAT5Q92993 513 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 LIN37Q96GY3 246 aaPredicted RBP7.36□□□□□ -1.23
UBR1-208ENST00000569066 FTSJ1Q9UET6 329 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 PTPN22Q9Y2R2 807 aa7.36□□□□□ -1.23
UBR1-208ENST00000569066 PMM2O15305 246 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 APEX1P27695 318 aaKnown RBP7.35□□□□□ -1.23
UBR1-208ENST00000569066 BCAR1P56945 870 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 PPP3CAQ08209 521 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 HDAC1Q13547 482 aaPredicted RBP7.35□□□□□ -1.23
UBR1-208ENST00000569066 SAFBQ15424 915 aaKnown RBP eCLIP7.35□□□□□ -1.23
UBR1-208ENST00000569066 ZMYM1Q5SVZ6 1142 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 LMBR1LQ6UX01 489 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 PRR18Q8N4B5 295 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 CDYL2Q8N8U2 506 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 GORASP1Q9BQQ3 440 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 MYH16Q9H6N6 1097 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 MAN1C1Q9NR34 630 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 SCOCQ9UIL1 159 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 PCDHGB6Q9Y5F9 930 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 N4BP3O15049 544 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 LDHAP00338 332 aaKnown RBP7.35□□□□□ -1.23
UBR1-208ENST00000569066 NBPF7P0C2Y1 421 aaPredicted RBP7.35□□□□□ -1.23
UBR1-208ENST00000569066 CACNB2Q08289 660 aaPredicted RBP7.35□□□□□ -1.23
UBR1-208ENST00000569066 OR5AN1Q8NGI8 311 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 MORC4Q8TE76 937 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 LRFN3Q9BTN0 628 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 APOL5Q9BWW9 433 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 BTBD2Q9BX70 525 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 DLL4Q9NR61 685 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 C1orf112Q9NSG2 853 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 USP25Q9UHP3 1055 aa7.35□□□□□ -1.23
UBR1-208ENST00000569066 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.34□□□□□ -1.23
UBR1-208ENST00000569066 ADAM23O75077 832 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 RHCEP18577 417 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 SRSF3P84103 164 aaKnown RBP7.34□□□□□ -1.23
UBR1-208ENST00000569066 RHDQ02161 417 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 C10orf62Q5T681 223 aaPredicted RBP7.34□□□□□ -1.23
UBR1-208ENST00000569066 GORABQ5T7V8 394 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 CHST15Q7LFX5 561 aaPredicted RBP7.34□□□□□ -1.23
UBR1-208ENST00000569066 SKAP1Q86WV1 359 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 BCL6BQ8N143 479 aaPredicted RBP7.34□□□□□ -1.23
UBR1-208ENST00000569066 SGPP1Q9BX95 441 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 DDX21Q9NR30 783 aaKnown RBP eCLIP7.34□□□□□ -1.23
UBR1-208ENST00000569066 DNAI1Q9UI46 699 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 CDC42EP3Q9UKI2 254 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 SYNPO2Q9UMS6 1093 aa7.34□□□□□ -1.23
UBR1-208ENST00000569066 OAS3Q9Y6K5 1087 aaKnown RBP7.34□□□□□ -1.23
UBR1-208ENST00000569066 A0A0A6YYJ9 748 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 MYOCOSA0A1B0GUC4 107 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 GLI1P08151 1106 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 LRP8Q14114 963 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 CBLL1Q75N03 491 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 ZSWIM9Q86XI8 627 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.34□□□□□ -1.24
UBR1-208ENST00000569066 PCDHA13Q9Y5I0 950 aa7.34□□□□□ -1.24
UBR1-208ENST00000569066 ZNF503-AS2A6NEH8 195 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 MGAT5Q09328 741 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 TMEM62Q0P6H9 643 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 KCNMB1Q16558 191 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 SWSAP1Q6NVH7 229 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 MARCH10Q8NA82 808 aaPredicted RBP7.33□□□□□ -1.24
UBR1-208ENST00000569066 B3GNT5Q9BYG0 378 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 KCMF1Q9P0J7 381 aa7.33□□□□□ -1.24
UBR1-208ENST00000569066 TMEM127O75204 238 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 NCAM1P13591 858 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 GSPT1P15170 499 aaKnown RBP7.32□□□□□ -1.24
UBR1-208ENST00000569066 MCAMP43121 646 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 SLC16A1P53985 500 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 EPHB3P54753 998 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 ATG4DQ86TL0 474 aaPredicted RBP7.32□□□□□ -1.24
UBR1-208ENST00000569066 IRF2BP1Q8IU81 584 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 NOX5Q96PH1 765 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 DIRC2Q96SL1 478 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 KCND1Q9NSA2 647 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 LRRC14BA6NHZ5 514 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 SEC24DO94855 1032 aaPredicted RBP7.32□□□□□ -1.24
UBR1-208ENST00000569066 CYP2C8P10632 490 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 SEPT2Q15019 361 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 STILQ15468 1287 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 ANO4Q32M45 955 aa7.32□□□□□ -1.24
UBR1-208ENST00000569066 CCDC149Q6ZUS6 474 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms