RNA–Protein interactions for RNA: ENST00000568799.1

GGA2-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 1,403 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-212ENST00000568799 UHRF1Q96T88 793 aaPredicted RBP23.56■■□□□ 1.36
GGA2-212ENST00000568799 MTRQ99707 1265 aa23.56■■□□□ 1.36
GGA2-212ENST00000568799 HSD17B14Q9BPX1 270 aa23.56■■□□□ 1.36
GGA2-212ENST00000568799 UBE2ZQ9H832 354 aaPredicted RBP23.56■■□□□ 1.36
GGA2-212ENST00000568799 ALG13Q9NP73 1137 aaKnown RBP23.56■■□□□ 1.36
GGA2-212ENST00000568799 PLAGL2Q9UPG8 496 aa23.56■■□□□ 1.36
GGA2-212ENST00000568799 REV3LO60673 3130 aa23.56■■□□□ 1.36
GGA2-212ENST00000568799 LYPLA2O95372 231 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 TRAPPC10P48553 1259 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 MCM2P49736 904 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 KCNQ1P51787 676 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 ZNF174Q15697 407 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 TCEAL5Q5H9L2 206 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 TTC38Q5R3I4 469 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 ECHDC2Q86YB7 292 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 ZNF579Q8NAF0 562 aaKnown RBP23.55■■□□□ 1.36
GGA2-212ENST00000568799 ERMNQ8TAM6 284 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 PRPF31Q8WWY3 499 aaKnown RBP23.55■■□□□ 1.36
GGA2-212ENST00000568799 PPP2R3CQ969Q6 453 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 TMEM117Q9H0C3 514 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 TMEM60Q9H2L4 133 aa23.55■■□□□ 1.36
GGA2-212ENST00000568799 PIN4Q9Y237 131 aaKnown RBP23.55■■□□□ 1.36
GGA2-212ENST00000568799 A0A0U1RQF3 1178 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 POTEMA6NI47 508 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 ASAP2O43150 1006 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 NCK2O43639 380 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 CSPG5O95196 566 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 OR52Z1P0C646 297 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 SKIP12755 728 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 CSPP1Q1MSJ5 1256 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 TWF2Q6IBS0 349 aaKnown RBP23.54■■□□□ 1.36
GGA2-212ENST00000568799 EP400NLQ6ZTU2 488 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 KLHL23Q8NBE8 558 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 ANKEF1Q9NU02 776 aa23.54■■□□□ 1.36
GGA2-212ENST00000568799 EOMESO95936 686 aa23.53■■□□□ 1.36
GGA2-212ENST00000568799 SRGAP2CP0DJJ0 459 aa23.53■■□□□ 1.36
GGA2-212ENST00000568799 LAMTOR4Q0VGL1 99 aa23.53■■□□□ 1.36
GGA2-212ENST00000568799 SRGAP1Q7Z6B7 1085 aa23.53■■□□□ 1.36
GGA2-212ENST00000568799 LRRC43Q8N309 656 aa23.53■■□□□ 1.36
GGA2-212ENST00000568799 TYW1Q9NV66 732 aaKnown RBP23.53■■□□□ 1.36
GGA2-212ENST00000568799 ZBTB39O15060 712 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 DGAT1O75907 488 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 ITGB1P05556 798 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 BMP1P13497 986 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 LAG3P18627 525 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 KCNA5P22460 613 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 TECP42680 631 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 MXD4Q14582 209 aaPredicted RBP23.52■■□□□ 1.36
GGA2-212ENST00000568799 THNSL1Q8IYQ7 743 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 TMX3Q96JJ7 454 aa23.52■■□□□ 1.36
GGA2-212ENST00000568799 TNFRSF10AO00220 468 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 PHKA2P46019 1235 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 TFDP1Q14186 410 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 FERMT3Q86UX7 667 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 RNF149Q8NC42 400 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 POF1BQ8WVV4 589 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 IFT122Q9HBG6 1241 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 TUFT1Q9NNX1 390 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 BRWD1Q9NSI6 2320 aa23.51■■□□□ 1.35
GGA2-212ENST00000568799 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.5■■□□□ 1.35
GGA2-212ENST00000568799 XRCC6P12956 609 aaKnown RBP eCLIP23.5■■□□□ 1.35
GGA2-212ENST00000568799 U2AF2P26368 475 aaKnown RBP eCLIP23.5■■□□□ 1.359e-7■■■■□ 20.1
GGA2-212ENST00000568799 RAB27AP51159 221 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 SPPL3Q8TCT6 385 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 PIGOQ8TEQ8 1089 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 RSPH1Q8WYR4 309 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 PABPC5Q96DU9 382 aaKnown RBP23.5■■□□□ 1.35
GGA2-212ENST00000568799 CASD1Q96PB1 797 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 MRPL9Q9BYD2 267 aaKnown RBP23.5■■□□□ 1.35
GGA2-212ENST00000568799 H3BQV1 296 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 RARRES1P49788 294 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 UBE3AQ05086 875 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 NCBP1Q09161 790 aaKnown RBP23.5■■□□□ 1.35
GGA2-212ENST00000568799 HAUS3Q68CZ6 603 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 MCTP1Q6DN14 999 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 COLGALT1Q8NBJ5 622 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 MICAL1Q8TDZ2 1067 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 NACC1Q96RE7 527 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 TRAIPQ9BWF2 469 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 RAB34Q9BZG1 259 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 CLDND1Q9NY35 253 aa23.5■■□□□ 1.35
GGA2-212ENST00000568799 ERLIN2O94905 339 aa23.49■■□□□ 1.35
GGA2-212ENST00000568799 LEXMQ3ZCV2 418 aa23.49■■□□□ 1.35
GGA2-212ENST00000568799 CATSPER3Q86XQ3 398 aa23.49■■□□□ 1.35
GGA2-212ENST00000568799 HELQQ8TDG4 1101 aa23.49■■□□□ 1.35
GGA2-212ENST00000568799 POLR3CQ9BUI4 534 aaPredicted RBP23.49■■□□□ 1.35
GGA2-212ENST00000568799 AGPAT5Q9NUQ2 364 aa23.49■■□□□ 1.35
GGA2-212ENST00000568799 FAM105AQ9NUU6 356 aa23.49■■□□□ 1.35
GGA2-212ENST00000568799 PUF60Q9UHX1 559 aaKnown RBP23.49■■□□□ 1.35
GGA2-212ENST00000568799 NCOR1O75376 2440 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 FGF18O76093 207 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 PPM1AP35813 382 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 PCBP1Q15365 356 aaKnown RBP eCLIP23.48■■□□□ 1.35
GGA2-212ENST00000568799 PUS10Q3MIT2 529 aaKnown RBP23.48■■□□□ 1.35
GGA2-212ENST00000568799 ZNF598Q86UK7 904 aaKnown RBP23.48■■□□□ 1.35
GGA2-212ENST00000568799 PGBD4Q96DM1 585 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 ZNF558Q96NG5 402 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 CWH43Q9H720 699 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 XPNPEP1Q9NQW7 623 aa23.48■■□□□ 1.35
GGA2-212ENST00000568799 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms