RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 SCN9AQ15858 1988 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 TNNC2P02585 160 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 TRIM49P0CI25 452 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 TRIM49CP0CI26 452 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 GCLMP48507 274 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 PMS1P54277 932 aaKnown RBP13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 TFAMQ00059 246 aaKnown RBP13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 DGKDQ16760 1214 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 CATSPER4Q7RTX7 472 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 CCDC60Q8IWA6 550 aaPredicted RBP13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 SEMA6BQ9H3T3 888 aa13.21□□□□□ -0.29
TMEM170A-205ENST00000568559 A0A1B0GUL6 1792 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 A0A1B0GTH6 734 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 AP5Z1O43299 807 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 RFC5P40937 340 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 ADCYAP1R1P41586 468 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 ZBED6P86452 979 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 PAXBP1Q9Y5B6 917 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 TUBGCP6Q96RT7 1819 aa13.21□□□□□ -0.3
TMEM170A-205ENST00000568559 TMEM88BA6NKF7 163 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 NEBLO76041 1014 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 IFI16Q16666 785 aaKnown RBP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 DEFB115Q30KQ5 88 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 EFCAB12Q6NXP0 572 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 SCFD1Q8WVM8 642 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 JAKMIP2Q96AA8 810 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 ABHD16BQ9H3Z7 469 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 TXNRD2Q9NNW7 524 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 DBR1Q9UK59 544 aaKnown RBP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 EPN1Q9Y6I3 576 aaPredicted RBP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 TRPA1O75762 1119 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 PIK3CAP42336 1068 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 YARSP54577 528 aaKnown RBP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 EDRF1Q3B7T1 1238 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 GNASQ5JWF2 1037 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 ATP2A1O14983 1001 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 MFAP3LO75121 409 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 LRRN2O75325 713 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 GNAT1P11488 350 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 CTNNA2P26232 953 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 PSMC4P43686 418 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 NFX1Q12986 1120 aaKnown RBP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 SHCBP1Q8NEM2 672 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 IFIH1Q9BYX4 1025 aaKnown RBP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 C2orf40Q9H1Z8 148 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 PRDM4Q9UKN5 801 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 PPP2R2CQ9Y2T4 447 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 KLRC4O43908 158 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 GUCY2CP25092 1073 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 CYP2C19P33261 490 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 NR1I3Q14994 352 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 CENPPQ6IPU0 288 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 CYP4F22Q6NT55 531 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 NT5C1BQ96P26 610 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 VTA1Q9NP79 307 aa13.2□□□□□ -0.3
TMEM170A-205ENST00000568559 GSTTP1A0A1W2PQM5 241 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 CTAGE9A4FU28 777 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 PAFAH1B1P43034 410 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 VAMP7P51809 220 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 MAP2K1Q02750 393 aaPredicted RBP13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 SF3A3Q12874 501 aaKnown RBP eCLIP13.19□□□□□ -0.39e-7■■■■■ 44.5
TMEM170A-205ENST00000568559 MXD4Q14582 209 aaPredicted RBP13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 ZNF568Q3ZCX4 644 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 GJC2Q5T442 439 aaPredicted RBP13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 GLIS3Q8NEA6 775 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 LENG9Q96B70 501 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 TINF2Q9BSI4 451 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 LDHAP00338 332 aaKnown RBP13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 CD19P15391 556 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 NPTX2P47972 431 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 ACVR2BQ13705 512 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 ZNF720Q7Z2F6 126 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 FRMD5Q7Z6J6 570 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 FAM133AQ8N9E0 248 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 TTC26A0AVF1 554 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 TMEM62Q0P6H9 643 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 PRAMEF19Q5SWL8 479 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 DNAJC19Q96DA6 116 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 UBE2TQ9NPD8 197 aaPredicted RBP13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 CEP83Q9Y592 693 aa13.19□□□□□ -0.3
TMEM170A-205ENST00000568559 SOWAHBA6NEL2 793 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 CCNE2O96020 404 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 ZNF286BP0CG31 522 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 YY1P25490 414 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 EFNA5P52803 228 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 C1orf186Q6ZWK4 172 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 SESTD1Q86VW0 696 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 MBOAT7Q96N66 472 aa13.18□□□□□ -0.3
TMEM170A-205ENST00000568559 PDGFCQ9NRA1 345 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms