RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 FLT3LGP49771 235 aa8.78□□□□□ -1
SMG1-214ENST00000568038 ALDH5A1P51649 535 aaPredicted RBP8.78□□□□□ -1
SMG1-214ENST00000568038 ARHGAP4P98171 946 aa8.78□□□□□ -1
SMG1-214ENST00000568038 PGM5Q15124 567 aa8.78□□□□□ -1
SMG1-214ENST00000568038 LETM2Q2VYF4 491 aa8.78□□□□□ -1
SMG1-214ENST00000568038 FAM117BQ6P1L5 589 aa8.78□□□□□ -1
SMG1-214ENST00000568038 BRAPQ7Z569 592 aa8.78□□□□□ -1
SMG1-214ENST00000568038 TEX2Q8IWB9 1127 aa8.78□□□□□ -1
SMG1-214ENST00000568038 TMEM130Q8N3G9 435 aa8.78□□□□□ -1
SMG1-214ENST00000568038 CEP120Q8N960 986 aa8.78□□□□□ -1
SMG1-214ENST00000568038 DNERQ8NFT8 737 aa8.78□□□□□ -1
SMG1-214ENST00000568038 IL31RAQ8NI17 732 aa8.78□□□□□ -1
SMG1-214ENST00000568038 SOCS4Q8WXH5 440 aa8.78□□□□□ -1
SMG1-214ENST00000568038 CHAMP1Q96JM3 812 aa8.78□□□□□ -1
SMG1-214ENST00000568038 FGD4Q96M96 766 aa8.78□□□□□ -1
SMG1-214ENST00000568038 PDCD2LQ9BRP1 358 aa8.78□□□□□ -1
SMG1-214ENST00000568038 SLC5A4Q9NY91 659 aa8.78□□□□□ -1
SMG1-214ENST00000568038 RTEL1Q9NZ71 1219 aa8.78□□□□□ -1
SMG1-214ENST00000568038 ADD3Q9UEY8 706 aaKnown RBP8.78□□□□□ -1
SMG1-214ENST00000568038 NOL7Q9UMY1 257 aaKnown RBP8.78□□□□□ -1
SMG1-214ENST00000568038 ASTN1O14525 1302 aa8.78□□□□□ -1
SMG1-214ENST00000568038 RPTORQ8N122 1335 aa8.78□□□□□ -1
SMG1-214ENST00000568038 MGAMO43451 1857 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 RBBP6Q7Z6E9 1792 aaKnown RBP8.77□□□□□ -1.01
SMG1-214ENST00000568038 EDIL3O43854 480 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 ACPPP15309 386 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 CCND2P30279 289 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 ZNF76P36508 570 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 CEBPZQ03701 1054 aaKnown RBP8.77□□□□□ -1.01
SMG1-214ENST00000568038 PRKCZQ05513 592 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 ARHGEF6Q15052 776 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 ZNF174Q15697 407 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 CCL14Q16627 93 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 EEPD1Q7L9B9 569 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 NEK8Q86SG6 692 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 USP6NLQ92738 828 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 MAML3Q96JK9 1138 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 POP1Q99575 1024 aaKnown RBP8.77□□□□□ -1.01
SMG1-214ENST00000568038 APBA2Q99767 749 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 ZFP64Q9NPA5 681 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 KCNK4Q9NYG8 393 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 SRRDQ9UH36 339 aa8.77□□□□□ -1.01
SMG1-214ENST00000568038 LCTP09848 1927 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 ASB14A6NK59 587 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 B4DLN1 442 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 FSCN2O14926 492 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 CCNT1O60563 726 aaKnown RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 TDP2O95551 362 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 CYP3A4P08684 503 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 HOXC6P09630 235 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 HSPA8P11142 646 aaKnown RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 NCLP19338 710 aaKnown RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 EPHA1P21709 976 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 MZF1P28698 734 aaPredicted RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 MCM7P33993 719 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 CD68P34810 354 aaPredicted RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 TOB1P50616 345 aaPredicted RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 USP11P51784 963 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 LBX1P52954 281 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 MRPS9P82933 396 aaKnown RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 STXBP2Q15833 593 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 RILPL1Q5EBL4 403 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 TTC38Q5R3I4 469 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 ARTNQ5T4W7 220 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 PCNX4Q63HM2 1172 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 PRR23CQ6ZRP0 262 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 ARMCX2Q7L311 632 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 CYP2W1Q8TAV3 490 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 CRYGNQ8WXF5 182 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 UIMC1Q96RL1 719 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 IWS1Q96ST2 819 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 MPHOSPH6Q99547 160 aaKnown RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 FTOQ9C0B1 505 aaKnown RBP eCLIP8.76□□□□□ -1.01
SMG1-214ENST00000568038 FLRT1Q9NZU1 646 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 POLIQ9UNA4 740 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 DIS3Q9Y2L1 958 aaKnown RBP8.76□□□□□ -1.01
SMG1-214ENST00000568038 TRIM17Q9Y577 477 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 PCDHB6Q9Y5E3 794 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 FRMPD4Q14CM0 1322 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 MYH7BA7E2Y1 1941 aa8.76□□□□□ -1.01
SMG1-214ENST00000568038 FAM86B1E9PN63 330 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 WISP1O95388 367 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 ABL1P00519 1130 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 FAM86B2P0C5J1 330 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 XRCC5P13010 732 aaKnown RBP8.75□□□□□ -1.01
SMG1-214ENST00000568038 ITGB5P18084 799 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 TRAPPC10P48553 1259 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 CTCFP49711 727 aaPredicted RBP8.75□□□□□ -1.01
SMG1-214ENST00000568038 PRR16Q569H4 304 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 SEPT14Q6ZU15 432 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 ACAD11Q709F0 780 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 OTOP1Q7RTM1 612 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 VSIG10LQ86VR7 867 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 PLA2G4DQ86XP0 818 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 RAET1EQ8TD07 263 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 TNPO1Q92973 898 aaKnown RBP8.75□□□□□ -1.01
SMG1-214ENST00000568038 ZNF396Q96N95 335 aaPredicted RBP8.75□□□□□ -1.01
SMG1-214ENST00000568038 NAP1L4Q99733 375 aaKnown RBP8.75□□□□□ -1.01
SMG1-214ENST00000568038 MXRA8Q9BRK3 442 aa8.75□□□□□ -1.01
SMG1-214ENST00000568038 WDR11Q9BZH6 1224 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms