RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 SUCLA2Q9P2R7 463 aaPredicted RBP17.17■□□□□ 0.34
CDR2-206ENST00000567406 IGKV6-21A0A0C4DH24 114 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 A0A0U1RQF3 1178 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 MEIS3P2A8K0S8 358 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 PLCB3Q01970 1234 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 HFE2Q6ZVN8 426 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 KRT25Q7Z3Z0 450 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 LRRC43Q8N309 656 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 RPGRIP1Q96KN7 1286 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 NLRP4Q96MN2 994 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 POP1Q99575 1024 aaKnown RBP17.16■□□□□ 0.34
CDR2-206ENST00000567406 GCOM2Q9BZD3 368 aaPredicted RBP17.16■□□□□ 0.34
CDR2-206ENST00000567406 WRAP73Q9P2S5 460 aaPredicted RBP17.16■□□□□ 0.34
CDR2-206ENST00000567406 PUF60Q9UHX1 559 aaKnown RBP17.16■□□□□ 0.34
CDR2-206ENST00000567406 CDH22Q9UJ99 828 aa17.16■□□□□ 0.34
CDR2-206ENST00000567406 CCDC194A0A1B0GVG4 234 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 FAM205CA6NFA0 338 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 HOXA2O43364 376 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
CDR2-206ENST00000567406 CTDNEP1O95476 244 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 SP100P23497 879 aaPredicted RBP17.15■□□□□ 0.34
CDR2-206ENST00000567406 TECP42680 631 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 PSMC5P62195 406 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 FAM43BQ6ZT52 329 aaPredicted RBP17.15■□□□□ 0.34
CDR2-206ENST00000567406 PIK3AP1Q6ZUJ8 805 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 TMC7Q7Z402 723 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 SPG21Q9NZD8 308 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 VAV3Q9UKW4 847 aa17.15■□□□□ 0.34
CDR2-206ENST00000567406 TECTAO75443 2155 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 LOC730098B7Z3J9 87 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 ZBTB39O15060 712 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 CCNT1O60563 726 aaKnown RBP17.14■□□□□ 0.33
CDR2-206ENST00000567406 MAFO75444 373 aaPredicted RBP17.14■□□□□ 0.33
CDR2-206ENST00000567406 CA8P35219 290 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 PHKA2P46019 1235 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 DNM2P50570 870 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 HERC4Q5GLZ8 1057 aaPredicted RBP17.14■□□□□ 0.33
CDR2-206ENST00000567406 TWF2Q6IBS0 349 aaKnown RBP17.14■□□□□ 0.33
CDR2-206ENST00000567406 GALNT17Q6IS24 598 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 MOXD1Q6UVY6 613 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 SLC39A11Q8N1S5 342 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 NECAB1Q8N987 351 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 HAS1Q92839 578 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 TMEM143Q96AN5 459 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 S1PR5Q9H228 398 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 PIN4Q9Y237 131 aaKnown RBP17.14■□□□□ 0.33
CDR2-206ENST00000567406 LZTS1Q9Y250 596 aa17.14■□□□□ 0.33
CDR2-206ENST00000567406 PFKFB2O60825 505 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 EOMESO95936 686 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 FOSBP53539 338 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 BCAR1P56945 870 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 KRT17Q04695 432 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 PPP2R5CQ13362 524 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 KCNC3Q14003 757 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 PDE12Q6L8Q7 609 aaKnown RBP17.13■□□□□ 0.33
CDR2-206ENST00000567406 ANKRD54Q6NXT1 300 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 SYCE2Q6PIF2 218 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 CATSPER4Q7RTX7 472 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 NEK8Q86SG6 692 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 TMEM173Q86WV6 379 aaPredicted RBP17.13■□□□□ 0.33
CDR2-206ENST00000567406 POTEDQ86YR6 584 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 ZNF710Q8N1W2 664 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 AUTS2Q8WXX7 1259 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 CEP170P1Q96L14 293 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 CDCA3Q99618 268 aaPredicted RBP17.13■□□□□ 0.33
CDR2-206ENST00000567406 KCNMB3Q9NPA1 279 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 CYP26B1Q9NR63 512 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 DACT1Q9NYF0 836 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 RGL1Q9NZL6 768 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 INPP5FQ9Y2H2 1132 aa17.13■□□□□ 0.33
CDR2-206ENST00000567406 ARIH1Q9Y4X5 557 aaPredicted RBP17.13■□□□□ 0.33
CDR2-206ENST00000567406 MARCH6O60337 910 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 ZC3H11AO75152 810 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDR2-206ENST00000567406 CDKL5O76039 1030 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 LARGE1O95461 756 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 SRGAP2CP0DJJ0 459 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 HOXD11P31277 338 aaPredicted RBP17.12■□□□□ 0.33
CDR2-206ENST00000567406 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
CDR2-206ENST00000567406 AK2P54819 239 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 NR5A1Q13285 461 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 CTTNQ14247 550 aaKnown RBP17.12■□□□□ 0.33
CDR2-206ENST00000567406 NCAPH2Q6IBW4 605 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 SUSD6Q92537 303 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 EDAQ92838 391 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 DYDC2Q96IM9 177 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 PHF7Q9BWX1 381 aaPredicted RBP17.12■□□□□ 0.33
CDR2-206ENST00000567406 GBP3Q9H0R5 595 aa17.12■□□□□ 0.33
CDR2-206ENST00000567406 NGRNQ9NPE2 291 aaKnown RBP17.12■□□□□ 0.33
CDR2-206ENST00000567406 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
CDR2-206ENST00000567406 C2orf71A6NGG8 1288 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 CXCL14O95715 111 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 P4HBP07237 508 aaKnown RBP17.11■□□□□ 0.33
CDR2-206ENST00000567406 FDPSP14324 419 aaKnown RBP17.11■□□□□ 0.33
CDR2-206ENST00000567406 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDR2-206ENST00000567406 PPM1AP35813 382 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 AFF1P51825 1210 aaKnown RBP17.11■□□□□ 0.33
CDR2-206ENST00000567406 CYP4A11Q02928 519 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 PPP4R3AQ6IN85 833 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 KANK3Q6NY19 840 aa17.11■□□□□ 0.33
CDR2-206ENST00000567406 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms