RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 EHD4Q9H223 541 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 GPRC5CQ9NQ84 441 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 CNOT8Q9UFF9 292 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 FAM198AQ9UFP1 575 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 PARP2Q9UGN5 583 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 FEZ2Q9UHY8 353 aaPredicted RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 ANAPC7Q9UJX3 599 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 ZNRF3Q9ULT6 936 aa12.5□□□□□ -0.41
CDH1-210ENST00000566612 REXO2Q9Y3B8 237 aaKnown RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 COL1A1P02452 1464 aaPredicted RBP12.5□□□□□ -0.41
CDH1-210ENST00000566612 PASKQ96RG2 1323 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 PPP1R11O60927 126 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 TMEM191BP0C7N4 346 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 KRT15P19012 456 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 KCTD19Q17RG1 926 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 CNKSR2Q8WXI2 1034 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 STK33Q9BYT3 514 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 UNC45AQ9H3U1 944 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 VGLL3A8MV65 326 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 GOLGA8SH3BPF8 625 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 TTI1O43156 1089 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 RAD51CO43502 376 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 PPFIA4O75335 1185 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 ZRANB2O95218 330 aaKnown RBP eCLIP12.49□□□□□ -0.41
CDH1-210ENST00000566612 PSMC5P62195 406 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 BFSP1Q12934 665 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 CRY2Q49AN0 593 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 DACT2Q5SW24 774 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 C15orf52Q6ZUT6 534 aaKnown RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 OR2W6PQ8NHA6 318 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 SLC30A5Q8TAD4 765 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 RFFLQ8WZ73 363 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 TAF1DQ9H5J8 278 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 VPS37BQ9H9H4 285 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 NRBP2Q9NSY0 501 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 APEX2Q9UBZ4 518 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 ZSCAN5CA6NGD5 496 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 MYO1CO00159 1063 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 PDE2AO00408 941 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 HDLBPQ00341 1268 aaKnown RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 MEA1Q16626 185 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 CYP4F22Q6NT55 531 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 TAOK1Q7L7X3 1001 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 ZNF571Q7Z3V5 609 aaPredicted RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 IQCGQ9H095 443 aaKnown RBP12.49□□□□□ -0.41
CDH1-210ENST00000566612 AGPAT3Q9NRZ7 376 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 HSPBP1Q9NZL4 362 aa12.49□□□□□ -0.41
CDH1-210ENST00000566612 CUL1Q13616 776 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 MIS18BP1Q6P0N0 1132 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 SCARA5Q6ZMJ2 495 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 ZBTB8OSQ8IWT0 167 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 DNAJC19Q96DA6 116 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 RNPC3Q96LT9 517 aaKnown RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 MXRA8Q9BRK3 442 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 POLR3CQ9BUI4 534 aaPredicted RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 CELF4Q9BZC1 486 aaKnown RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 PLCB1Q9NQ66 1216 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 SIK3Q9Y2K2 1263 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 ATMINO43313 823 aaPredicted RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 JAK3P52333 1124 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 EPC2Q52LR7 807 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 APTXQ7Z2E3 356 aaKnown RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 SAMD7Q7Z3H4 446 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 CCDC91Q7Z6B0 441 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 CDAN1Q8IWY9 1227 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 GMCL1Q96IK5 515 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 AGPAT1Q99943 283 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 FGFBP2Q9BYJ0 223 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 TBK1Q9UHD2 729 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 H0YCG3 227 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 MEIS2O14770 477 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 SLC16A3O15427 465 aaKnown RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 CTNND1O60716 968 aaKnown RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 ACSL3O95573 720 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 ATF2P15336 505 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 RPS6P62753 249 aaKnown RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 LACTBP83111 547 aaPredicted RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 KRT76Q01546 638 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 ALCAMQ13740 583 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 NBPF9Q3BBW0 867 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 WDR93Q6P2C0 686 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
CDH1-210ENST00000566612 CACNA2D3Q8IZS8 1091 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 GPATCH11Q8N954 259 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 TAAR1Q96RJ0 339 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 KCNG1Q9UIX4 513 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 FBXL5Q9UKA1 691 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 NID2Q14112 1375 aa12.48□□□□□ -0.41
CDH1-210ENST00000566612 NFIBO00712 420 aa12.47□□□□□ -0.41
CDH1-210ENST00000566612 ZBTB22O15209 634 aa12.47□□□□□ -0.41
CDH1-210ENST00000566612 NEBLO76041 1014 aa12.47□□□□□ -0.41
CDH1-210ENST00000566612 ECEL1O95672 775 aa12.47□□□□□ -0.41
CDH1-210ENST00000566612 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
CDH1-210ENST00000566612 BPIFB4P59827 614 aa12.47□□□□□ -0.41
CDH1-210ENST00000566612 GUCY1A3Q02108 690 aa12.47□□□□□ -0.41
CDH1-210ENST00000566612 STYK1Q6J9G0 422 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms