RNA–Protein interactions for RNA: ENST00000566482.5

CNEP1R1-208, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-208ENST00000566482 ASAP3Q8TDY4 903 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 ARNTL2Q8WYA1 636 aa14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 INO80BQ9C086 356 aaPredicted RBP14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 POLR3FQ9H1D9 316 aaPredicted RBP14.33□□□□□ -0.12
CNEP1R1-208ENST00000566482 DGKIO75912 1065 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 STAG3L1P0CL83 205 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 ZSCAN20P17040 1043 aaPredicted RBP14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 ARL2P36404 184 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 ERVK-21P61565 698 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 PADI6Q6TGC4 694 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 SLC24A5Q71RS6 500 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 MAEAQ7L5Y9 396 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 CATSPER4Q7RTX7 472 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 SRGAP1Q7Z6B7 1085 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 MCPH1Q8NEM0 835 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 ZNF689Q96CS4 500 aaPredicted RBP14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 TGS1Q96RS0 853 aaKnown RBP14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 GAS2L1Q99501 681 aaPredicted RBP14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 BHMT2Q9H2M3 363 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 ZSCAN16Q9H4T2 348 aaPredicted RBP14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 MINDY3Q9H8M7 445 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 RC3H2Q9HBD1 1191 aaKnown RBP14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 GPRC5CQ9NQ84 441 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 LRFN2Q9ULH4 789 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 ADGRA3Q8IWK6 1321 aa14.32□□□□□ -0.12
CNEP1R1-208ENST00000566482 RFXAPO00287 272 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 EYA4O95677 639 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 CYP11B2P19099 503 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 GLRA2P23416 452 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 PHKA2P46019 1235 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 GATMP50440 423 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 FAM189BP81408 668 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 GRIN1Q05586 938 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 CAPSQ13938 189 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 TFDP1Q14186 410 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 ADGRE1Q14246 886 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 PTPAQ15257 358 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 ZRSR1Q15695 479 aaKnown RBP14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 HYIQ5T013 277 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 FOXD4L5Q5VV16 416 aaPredicted RBP14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 KCNK18Q7Z418 384 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 FOXD4L4Q8WXT5 416 aaPredicted RBP14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 C17orf80Q9BSJ5 609 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 MTUS1Q9ULD2 1270 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 DNM3Q9UQ16 869 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 PCDHB7Q9Y5E2 793 aa14.31□□□□□ -0.12
CNEP1R1-208ENST00000566482 E9PMD0 336 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 PTENP60484 403 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 CEBPZQ03701 1054 aaKnown RBP14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 GRB10Q13322 594 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 PAN2Q504Q3 1202 aaKnown RBP14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 FAM102BQ5T8I3 360 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 CABP7Q86V35 215 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 ECHDC2Q86YB7 292 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 FIBCD1Q8N539 461 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 AK8Q96MA6 479 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 PNMA5Q96PV4 448 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 USP28Q96RU2 1077 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 PLIN2Q99541 437 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 CHST12Q9NRB3 414 aa14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 PIN4Q9Y237 131 aaKnown RBP14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 COL4A4P53420 1690 aaPredicted RBP14.3□□□□□ -0.12
CNEP1R1-208ENST00000566482 CDH23Q9H251 3354 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 IGFBP4P22692 258 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 LONP1P36776 959 aaKnown RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 POU5F1BQ06416 359 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 BTG3Q14201 252 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 TMEM119Q4V9L6 283 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 TWF2Q6IBS0 349 aaKnown RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 IFNLR1Q8IU57 520 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 CMTR2Q8IYT2 770 aaKnown RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 FBXO22Q8NEZ5 403 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 MAFAQ8NHW3 353 aaPredicted RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 GDPD5Q8WTR4 605 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 BSNDQ8WZ55 320 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 CDK5RAP3Q96JB5 506 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 SAMD11Q96NU1 681 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 NT5C3AQ9H0P0 336 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 ELAC1Q9H777 363 aaKnown RBP14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 AGPAT5Q9NUQ2 364 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 RNF19AQ9NV58 838 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 TMEM161AQ9NX61 479 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 DACT1Q9NYF0 836 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 COL6A3P12111 3177 aa14.29□□□□□ -0.12
CNEP1R1-208ENST00000566482 A0A0U1RQF3 1178 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 LRRIQ4A6NIV6 560 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 INO80B-WBP1J3KQ70 363 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 SLC26A4O43511 780 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 LINC00271P0C7V0 271 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 FGFR1P11362 822 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 PDIA4P13667 645 aaKnown RBP14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 ATF7P17544 494 aaPredicted RBP14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 UBA7P41226 1012 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 MBTD1Q05BQ5 628 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 EPC2Q52LR7 807 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 TMEM192Q8IY95 271 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 RNF169Q8NCN4 708 aa14.28□□□□□ -0.12
CNEP1R1-208ENST00000566482 RUSC1Q9BVN2 902 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms