RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PLCB2Q00722 1185 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 SPAG1Q07617 926 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 EMC2Q15006 297 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 LRRC41Q15345 812 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 ZNF484Q5JVG2 852 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 SPIRE2Q8WWL2 714 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 SH2D3AQ9BRG2 576 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 TRIM5Q9C035 493 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 SEMA6BQ9H3T3 888 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 THAP9Q9H5L6 903 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 COL1A2P08123 1366 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 ADCY6O43306 1168 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 DUSP11O75319 330 aaKnown RBP21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 ADCY5O95622 1261 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 CPT1AP50416 773 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 SMTNP53814 917 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 SHHQ15465 462 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 KNOP1Q1ED39 458 aaKnown RBP21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 TRIM60Q495X7 471 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 CDKAL1Q5VV42 579 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 ANKRD40Q6AI12 368 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 MAEAQ7L5Y9 396 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 TLK2Q86UE8 772 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 TRIM50Q86XT4 487 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 FIZ1Q96SL8 496 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 NTPCRQ9BSD7 190 aaKnown RBP21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 C16orf70Q9BSU1 422 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 XPNPEP1Q9NQW7 623 aa21.02■□□□□ 0.96
CSPG4P13-201ENST00000565545 TRIM49BA6NDI0 452 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 H0YCG3 227 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 CBFA2T2O43439 604 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 PMS1P54277 932 aaKnown RBP21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 TBC1D8BQ0IIM8 1120 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 DMP1Q13316 513 aaPredicted RBP21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 FAM114A1Q8IWE2 563 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 CSGALNACT2Q8N6G5 542 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 GLIS3Q8NEA6 775 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 ANKRD20A12PQ8NF67 263 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 BADQ92934 168 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 HVCN1Q96D96 273 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 PDLIM2Q96JY6 352 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 IFT74Q96LB3 600 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 PPP1R9BQ96SB3 815 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 DUSP9Q99956 384 aaKnown RBP21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 STRA6Q9BX79 667 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 FGFBP2Q9BYJ0 223 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 POLD4Q9HCU8 107 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 SAMSN1Q9NSI8 373 aaKnown RBP21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 TRPC6Q9Y210 931 aa21.01■□□□□ 0.95
CSPG4P13-201ENST00000565545 H3BRB1 525 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 PDXKO00764 312 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 AP5Z1O43299 807 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 KPNA6O60684 536 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 PPP1R37O75864 691 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 MYBP10242 640 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 MARK3P27448 753 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 NMT1P30419 496 aaKnown RBP21■□□□□ 0.95
CSPG4P13-201ENST00000565545 ZNF75DP51815 510 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 CASP5P51878 434 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 NCKAP1LP55160 1127 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 FANCCQ00597 558 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 PPP2R5AQ15172 486 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 EDRF1Q3B7T1 1238 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 ZCWPW2Q504Y3 356 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21■□□□□ 0.95
CSPG4P13-201ENST00000565545 TCP11Q8WWU5 503 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 KCNN1Q92952 543 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 MRFAP1L1Q96HT8 127 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 CTAGE1Q96RT6 745 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 COL25A1Q9BXS0 654 aaPredicted RBP21■□□□□ 0.95
CSPG4P13-201ENST00000565545 KCTD10Q9H3F6 313 aa21■□□□□ 0.95
CSPG4P13-201ENST00000565545 TUT1Q9H6E5 874 aaKnown RBP21■□□□□ 0.95
CSPG4P13-201ENST00000565545 IGKV6-21A0A0C4DH24 114 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 K7ENM7 598 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 CALUO43852 315 aaPredicted RBP20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 PRPF6O94906 941 aaKnown RBP20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 PTGS1P23219 599 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 ARL2P36404 184 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 NKX3-2P78367 333 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 GTF2BQ00403 316 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 FKBP3Q00688 224 aaKnown RBP20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 C9orf50Q5SZB4 431 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 IER5Q5VY09 327 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 SRRTQ9BXP5 876 aaKnown RBP20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 POLR3FQ9H1D9 316 aaPredicted RBP20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 TMEM206Q9H813 350 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 GPRC5CQ9NQ84 441 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 TYW1Q9NV66 732 aaKnown RBP20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 TRAF3IP3Q9Y228 551 aa20.99■□□□□ 0.95
CSPG4P13-201ENST00000565545 ZBTB42B2RXF5 422 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 MAGEB2O15479 319 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 SERPINC1P01008 464 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 TPM3P06753 285 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 ATP1A3P13637 1013 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 EEF1GP26641 437 aaKnown RBP20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 CDC25BP30305 580 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 PEX3P56589 373 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 SNRPFP62306 86 aaKnown RBP20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 NFIL3Q16649 462 aa20.98■□□□□ 0.95
CSPG4P13-201ENST00000565545 NELFCDQ8IXH7 590 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms