RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 GTF3C6Q969F1 213 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 AAASQ9NRG9 546 aa26.65■■□□□ 1.86
RAB40C-209ENST00000565511 SUCLA2Q9P2R7 463 aaPredicted RBP26.65■■□□□ 1.86
RAB40C-209ENST00000565511 JAK2O60674 1132 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 GPR37L1O60883 481 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 FOSBP53539 338 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 UBE3AQ05086 875 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 RHPN2Q8IUC4 686 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 ZNF710Q8N1W2 664 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 NSUN7Q8NE18 718 aaKnown RBP26.64■■□□□ 1.86
RAB40C-209ENST00000565511 FAM20AQ96MK3 541 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 GCOM2Q9BZD3 368 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-209ENST00000565511 CYP26B1Q9NR63 512 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 BMP2KQ9NSY1 1161 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-209ENST00000565511 RNF216Q9NWF9 866 aaPredicted RBP26.64■■□□□ 1.86
RAB40C-209ENST00000565511 RGL1Q9NZL6 768 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 PRKAG3Q9UGI9 489 aa26.64■■□□□ 1.86
RAB40C-209ENST00000565511 A0A0U1RQF3 1178 aa26.63■■□□□ 1.85
RAB40C-209ENST00000565511 MEIS3P2A8K0S8 358 aa26.63■■□□□ 1.85
RAB40C-209ENST00000565511 GCFC2P16383 781 aaKnown RBP26.63■■□□□ 1.85
RAB40C-209ENST00000565511 QARSP47897 775 aaKnown RBP26.63■■□□□ 1.85
RAB40C-209ENST00000565511 KCNT2Q6UVM3 1135 aa26.63■■□□□ 1.85
RAB40C-209ENST00000565511 LRRC43Q8N309 656 aa26.63■■□□□ 1.85
RAB40C-209ENST00000565511 ZBTB39O15060 712 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 EYA4O95677 639 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 LONRF3Q496Y0 759 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 PLPP4Q5VZY2 271 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 SMRP1Q8NCR6 262 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 MICAL1Q8TDZ2 1067 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 LPPQ93052 612 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 NLRP4Q96MN2 994 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 LXNQ9BS40 222 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 TLE6Q9H808 572 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 FAM50BQ9Y247 325 aa26.62■■□□□ 1.85
RAB40C-209ENST00000565511 HOXA2O43364 376 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 PLCB3Q01970 1234 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 ANKRD1Q15327 319 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 DUSP6Q16828 381 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 NCAPH2Q6IBW4 605 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 MRPS27Q92552 414 aaKnown RBP26.61■■□□□ 1.85
RAB40C-209ENST00000565511 PPP2R3CQ969Q6 453 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 DYDC2Q96IM9 177 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 IFT122Q9HBG6 1241 aa26.61■■□□□ 1.85
RAB40C-209ENST00000565511 HIDE1A8MVS5 230 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 P4HBP07237 508 aaKnown RBP26.6■■□□□ 1.85
RAB40C-209ENST00000565511 XBP1P17861 261 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 KRT2P35908 639 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 PHKA2P46019 1235 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 COASYQ13057 564 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 EPHA7Q15375 998 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 ZNF410Q86VK4 478 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 ABI1Q8IZP0 508 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 TMEM143Q96AN5 459 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 ZNF558Q96NG5 402 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 DHX33Q9H6R0 707 aaKnown RBP26.6■■□□□ 1.85
RAB40C-209ENST00000565511 MINDY3Q9H8M7 445 aa26.6■■□□□ 1.85
RAB40C-209ENST00000565511 PIN4Q9Y237 131 aaKnown RBP26.6■■□□□ 1.85
RAB40C-209ENST00000565511 TBX3O15119 743 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 DNM2P50570 870 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 CYP4A11Q02928 519 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 KCNC3Q14003 757 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 CTTNQ14247 550 aaKnown RBP26.59■■□□□ 1.85
RAB40C-209ENST00000565511 CSPP1Q1MSJ5 1256 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 SLC39A11Q8N1S5 342 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 CEP170P1Q96L14 293 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 LZTS1Q9Y250 596 aa26.59■■□□□ 1.85
RAB40C-209ENST00000565511 USP15Q9Y4E8 981 aaPredicted RBP26.59■■□□□ 1.85
RAB40C-209ENST00000565511 NT5C1B-RDH14C9J2C7 533 aa26.58■■□□□ 1.85
RAB40C-209ENST00000565511 B4GALT3O60512 393 aa26.58■■□□□ 1.85
RAB40C-209ENST00000565511 EOMESO95936 686 aa26.58■■□□□ 1.85
RAB40C-209ENST00000565511 SFPQP23246 707 aaKnown RBP eCLIP26.58■■□□□ 1.85
RAB40C-209ENST00000565511 TMEM173Q86WV6 379 aaPredicted RBP26.58■■□□□ 1.85
RAB40C-209ENST00000565511 TCF25Q9BQ70 676 aa26.58■■□□□ 1.85
RAB40C-209ENST00000565511 DACT1Q9NYF0 836 aa26.58■■□□□ 1.85
RAB40C-209ENST00000565511 COL4A3BPQ9Y5P4 624 aa26.58■■□□□ 1.85
RAB40C-209ENST00000565511 TRIOO75962 3097 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 BTBD18B2RXH4 712 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 DCXO43602 365 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 NEK4P51957 841 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 TWF2Q6IBS0 349 aaKnown RBP26.57■■□□□ 1.84
RAB40C-209ENST00000565511 CATSPER4Q7RTX7 472 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 C4orf19Q8IY42 314 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 BCL7CQ8WUZ0 217 aaPredicted RBP26.57■■□□□ 1.84
RAB40C-209ENST00000565511 WASF1Q92558 559 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 TRAIPQ9BWF2 469 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 ENTPD7Q9NQZ7 604 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 CHST12Q9NRB3 414 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 TECTAO75443 2155 aa26.57■■□□□ 1.84
RAB40C-209ENST00000565511 YWHABP31946 246 aaKnown RBP26.56■■□□□ 1.84
RAB40C-209ENST00000565511 POLGP54098 1239 aaPredicted RBP26.56■■□□□ 1.84
RAB40C-209ENST00000565511 EMC2Q15006 297 aa26.56■■□□□ 1.84
RAB40C-209ENST00000565511 PRPF31Q8WWY3 499 aaKnown RBP26.56■■□□□ 1.84
RAB40C-209ENST00000565511 XPNPEP1Q9NQW7 623 aa26.56■■□□□ 1.84
RAB40C-209ENST00000565511 FAM105AQ9NUU6 356 aa26.56■■□□□ 1.84
RAB40C-209ENST00000565511 SPG21Q9NZD8 308 aa26.56■■□□□ 1.84
RAB40C-209ENST00000565511 MUTYHQ9UIF7 546 aa26.56■■□□□ 1.84
RAB40C-209ENST00000565511 BCAR1P56945 870 aa26.55■■□□□ 1.84
RAB40C-209ENST00000565511 CDC42EP1Q00587 391 aa26.55■■□□□ 1.84
RAB40C-209ENST00000565511 LAMTOR4Q0VGL1 99 aa26.55■■□□□ 1.84
RAB40C-209ENST00000565511 LLGL2Q6P1M3 1020 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms