RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 FOSBP53539 338 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 SPOUT1Q5T280 376 aaKnown RBP17.54■□□□□ 0.4
CDH3-204ENST00000565453 NCAPH2Q6IBW4 605 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 EP400NLQ6ZTU2 488 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 CEP170P1Q96L14 293 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 TRAIPQ9BWF2 469 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 IGFLR1Q9H665 355 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 EPHX3Q9H6B9 360 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 CHST12Q9NRB3 414 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 DACT1Q9NYF0 836 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 PCDHGC5Q9Y5F6 944 aa17.54■□□□□ 0.4
CDH3-204ENST00000565453 MARCH6O60337 910 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 SLITRK3O94933 977 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 BAG4O95429 457 aaKnown RBP17.53■□□□□ 0.4
CDH3-204ENST00000565453 EOMESO95936 686 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 YWHABP31946 246 aaKnown RBP17.53■□□□□ 0.4
CDH3-204ENST00000565453 PLCB3Q01970 1234 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 CSPP1Q1MSJ5 1256 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 LRRC43Q8N309 656 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 EFHBQ8N7U6 833 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 KIF2CQ99661 725 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 INO80BQ9C086 356 aaPredicted RBP17.53■□□□□ 0.4
CDH3-204ENST00000565453 IFT122Q9HBG6 1241 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 LIMCH1Q9UPQ0 1083 aa17.53■□□□□ 0.4
CDH3-204ENST00000565453 FSCN2O14926 492 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 ZBTB39O15060 712 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 SFPQP23246 707 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDH3-204ENST00000565453 RFC5P40937 340 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 ERVFC1P60507 584 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 CTTNQ14247 550 aaKnown RBP17.52■□□□□ 0.4
CDH3-204ENST00000565453 THNSL1Q8IYQ7 743 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 GJD3Q8N144 294 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 SLC7A3Q8WY07 619 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 PPP2R3CQ969Q6 453 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 MSLNLQ96KJ4 702 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 NLRP4Q96MN2 994 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 MTMR9Q96QG7 549 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 HSD17B14Q9BPX1 270 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 EIF2AK1Q9BQI3 630 aaKnown RBP17.52■□□□□ 0.4
CDH3-204ENST00000565453 ZSWIM4Q9H7M6 989 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 TLR9Q9NR96 1032 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 LZTS1Q9Y250 596 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 COL4A3BPQ9Y5P4 624 aa17.52■□□□□ 0.4
CDH3-204ENST00000565453 ARID2Q68CP9 1835 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 MBTPS2O43462 519 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 LYPLA2O95372 231 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 GLP2RO95838 553 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 PHKA2P46019 1235 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 POLGP54098 1239 aaPredicted RBP17.51■□□□□ 0.39
CDH3-204ENST00000565453 CYP4A11Q02928 519 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 TRIM29Q14134 588 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 SMAD2Q15796 467 aaKnown RBP17.51■□□□□ 0.39
CDH3-204ENST00000565453 CALCRLQ16602 461 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 KCNT2Q6UVM3 1135 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 CCDC83Q8IWF9 413 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 EXOC8Q8IYI6 725 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 ABI1Q8IZP0 508 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 RNF169Q8NCN4 708 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 HELQQ8TDG4 1101 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 PRPF31Q8WWY3 499 aaKnown RBP17.51■□□□□ 0.39
CDH3-204ENST00000565453 TMEM143Q96AN5 459 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 C1QTNF1Q9BXJ1 281 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 CLEC1BQ9P126 229 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 PRKAG3Q9UGI9 489 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 PCDHA12Q9UN75 941 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 FAM50BQ9Y247 325 aa17.51■□□□□ 0.39
CDH3-204ENST00000565453 C19orf67A6NJJ6 358 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 PI4K2BG5E9Z4 385 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 GAS2O43903 313 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 NEMFO60524 1076 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 PBX3P40426 434 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 NRIP1P48552 1158 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 ZP2Q05996 745 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 LAMTOR4Q0VGL1 99 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 SMAD4Q13485 552 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 EMC2Q15006 297 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 CLUL1Q15846 466 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 XKR9Q5GH70 373 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 OTUD6AQ7L8S5 288 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 CATSPER4Q7RTX7 472 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 RBM23Q86U06 439 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 TPH2Q8IWU9 490 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 PSPC1Q8WXF1 523 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 MRPS27Q92552 414 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 ZNF558Q96NG5 402 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 LLPHQ9BRT6 129 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 TMEM60Q9H2L4 133 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 TTC12Q9H892 705 aaPredicted RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 MINDY3Q9H8M7 445 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 XPNPEP1Q9NQW7 623 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 AGPAT5Q9NUQ2 364 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 CD207Q9UJ71 328 aa17.5■□□□□ 0.39
CDH3-204ENST00000565453 PIN4Q9Y237 131 aaKnown RBP17.5■□□□□ 0.39
CDH3-204ENST00000565453 ZNF623O75123 536 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 EYA4O95677 639 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 COL9A1P20849 921 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 NDUFV1P49821 464 aa17.49■□□□□ 0.39
CDH3-204ENST00000565453 GUCY1B3Q02153 619 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms