RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 PKD2L1Q9P0L9 805 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 ZFP37Q9Y6Q3 630 aaPredicted RBP10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 CLUHO75153 1309 aa10.33□□□□□ -0.76
VPS9D1-205ENST00000565452 B4E1Z4 1266 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 ZC3H11AO75152 810 aaKnown RBP eCLIP10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 GALTP07902 379 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 CNPP09543 421 aaKnown RBP10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 ITGB5P18084 799 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 GPC5P78333 572 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 PPP2R5DQ14738 602 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 CSRP2Q16527 193 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 USP17L6PQ6QN14 398 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 SMG7Q92540 1137 aaKnown RBP10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 PHKBQ93100 1093 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 SDF4Q9BRK5 362 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 MYL10Q9BUA6 226 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 DDX23Q9BUQ8 820 aaKnown RBP10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 KRT23Q9C075 422 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 SEMA4GQ9NTN9 838 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 SSX2IPQ9Y2D8 614 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 PCDHB15Q9Y5E8 787 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 NEDD4P46934 1319 aa10.32□□□□□ -0.76
VPS9D1-205ENST00000565452 KIAA1671Q9BY89 1806 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 PIK3CDO00329 1044 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 GPR32O75388 356 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 ALDH2P05091 517 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 ACTR2P61160 394 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 PFKPQ01813 784 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 RNASELQ05823 741 aaKnown RBP10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 HTR4Q13639 388 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 WTAPQ15007 396 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 MLF2Q15773 248 aaPredicted RBP10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 FAM160B1Q5W0V3 765 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 LRSAM1Q6UWE0 723 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 METTL13Q8N6R0 699 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 HDAC7Q8WUI4 952 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 CLDN23Q96B33 292 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 FAM227BQ96M60 508 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 JADE2Q9NQC1 790 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 MAN1C1Q9NR34 630 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 ZMIZ1Q9ULJ6 1067 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 MTF2Q9Y483 593 aaPredicted RBP10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 UBIAD1Q9Y5Z9 338 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 NUMBLQ9Y6R0 609 aa10.31□□□□□ -0.76
VPS9D1-205ENST00000565452 MEIS2O14770 477 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 INPPL1O15357 1258 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 LILRB3O75022 631 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 SSBP05455 408 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 ADH1AP07327 375 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 MX1P20591 662 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 EIF4BP23588 611 aaKnown RBP10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 RPS9P46781 194 aaKnown RBP10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 LPAL2Q16609 132 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 TSSK4Q6SA08 328 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 PRR23CQ6ZRP0 262 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 ZNF598Q86UK7 904 aaKnown RBP10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 KDF1Q8NAX2 398 aaPredicted RBP10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 PPP1R16BQ96T49 567 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 CNNM2Q9H8M5 875 aa10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 MRPS17Q9Y2R5 130 aaKnown RBP10.3□□□□□ -0.76
VPS9D1-205ENST00000565452 COL1A2P08123 1366 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 A0A0D9SFI3 127 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 BACH1O14867 736 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 ATG7O95352 703 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 GLUD1P00367 558 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 VTNP04004 478 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 SKIP12755 728 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 TMOD1P28289 359 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 AK2P54819 239 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 NLRP11P59045 1033 aaKnown RBP10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 GRM4Q14833 912 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 NOMO2Q5JPE7 1267 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 GLB1LQ6UWU2 654 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 ZNF852Q6ZMS4 543 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 PRR23BQ6ZRT6 265 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 TMEM173Q86WV6 379 aaPredicted RBP10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 PIBF1Q8WXW3 757 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 NT5C3AQ9H0P0 336 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 PLEKHA4Q9H4M7 779 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 NRDE2Q9H7Z3 1164 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 PSTPIP2Q9H939 334 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 LTB4R2Q9NPC1 389 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 CHST12Q9NRB3 414 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 KCNH7Q9NS40 1196 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 FNDC1Q4ZHG4 1894 aaPredicted RBP10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 NFASCO94856 1347 aa10.29□□□□□ -0.76
VPS9D1-205ENST00000565452 MAGEB2O15479 319 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 CYTH3O43739 400 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 GAS2O43903 313 aaKnown RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 GDF9O60383 454 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 RFPL2O75678 378 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 C1RP00736 705 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 CD72P21854 359 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 LIMK1P53667 647 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 SIM2Q14190 667 aaPredicted RBP10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 SLC35G1Q2M3R5 365 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 PDXDC2PQ6P474 469 aa10.28□□□□□ -0.76
VPS9D1-205ENST00000565452 UNQ6494/PRO21346Q6UXR6 183 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms