RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 ANO5Q75V66 913 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 ZNF598Q86UK7 904 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 C4orf19Q8IY42 314 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 SLC7A3Q8WY07 619 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 MRPS27Q92552 414 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 KHSRPQ92945 711 aaKnown RBP eCLIP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 ZNF558Q96NG5 402 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 MRPL9Q9BYD2 267 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 VAV3Q9UKW4 847 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 HCN4Q9Y3Q4 1203 aa13.66□□□□□ -0.22
GTF3C1-204ENST00000564664 PRR33A8MZF0 331 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 DCXO43602 365 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 SLC37A4O43826 429 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 ZNF623O75123 536 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 TBX10O75333 385 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 RFC5P40937 340 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 NRIP1P48552 1158 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 KCNT2Q6UVM3 1135 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 LRRC55Q6ZSA7 311 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 PIK3AP1Q6ZUJ8 805 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 RHPN2Q8IUC4 686 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 RNF19AQ9NV58 838 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 SPG21Q9NZD8 308 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
GTF3C1-204ENST00000564664 A0A087WZ62 844 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 EML1O00423 815 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 LINC01565O15544 149 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 CTDNEP1O95476 244 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 KRT2P35908 639 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 PHKA2P46019 1235 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 ALDH7A1P49419 539 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 RAB27AP51159 221 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 AK2P54819 239 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 ERVFC1P60507 584 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 DRP2Q13474 957 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 PCBP1Q15365 356 aaKnown RBP eCLIP13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 DUSP6Q16828 381 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 SRGAP1Q7Z6B7 1085 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 RBM23Q86U06 439 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 SMRP1Q8NCR6 262 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 TCP11Q8WWU5 503 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 HAS1Q92839 578 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 PGBD4Q96DM1 585 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 CEP170P1Q96L14 293 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 FDXACB1Q9BRP7 624 aaPredicted RBP13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 DHX33Q9H6R0 707 aaKnown RBP13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 ZSWIM4Q9H7M6 989 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 STK39Q9UEW8 545 aa13.64□□□□□ -0.23
GTF3C1-204ENST00000564664 FDPSP14324 419 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 HOXB8P17481 243 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 ATF7P17544 494 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 CLUL1Q15846 466 aa13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 CLLU1OSQ5K130 101 aa13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 TWF2Q6IBS0 349 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 CATSPER4Q7RTX7 472 aa13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 OXER1Q8TDS5 423 aa13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 PSPC1Q8WXF1 523 aaKnown RBP13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 GTF3C6Q969F1 213 aa13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 C11orf16Q9NQ32 467 aa13.63□□□□□ -0.23
GTF3C1-204ENST00000564664 ATG2AQ2TAZ0 1938 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 KIAA1671Q9BY89 1806 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 TMEM150BA6NC51 233 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 XRCC6P12956 609 aaKnown RBP eCLIP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 FGFR4P22455 802 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 YWHABP31946 246 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 POLGP54098 1239 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 POU5F1BQ06416 359 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 KCNC3Q14003 757 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 TRIM29Q14134 588 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 GIT2Q14161 759 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 MXD4Q14582 209 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 ME3Q16798 604 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 HERC4Q5GLZ8 1057 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 GLB1LQ6UWU2 654 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 TMC7Q7Z402 723 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 RNF169Q8NCN4 708 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 PRPF31Q8WWY3 499 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 TNFRSF25Q93038 417 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 FAM122AQ96E09 287 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 ZNF668Q96K58 619 aaPredicted RBP13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 TCF25Q9BQ70 676 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 IFT122Q9HBG6 1241 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 ENTPD7Q9NQZ7 604 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 KANSL3Q9P2N6 904 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 PCDHA12Q9UN75 941 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 COL4A3BPQ9Y5P4 624 aa13.62□□□□□ -0.23
GTF3C1-204ENST00000564664 PER2O15055 1255 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 CSDE1O75534 798 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 SLITRK3O94933 977 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 CSPG5O95196 566 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 LYPLA2O95372 231 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 GLP2RO95838 553 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 PLA2G5P39877 138 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 NEK4P51957 841 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 NPEPPSP55786 919 aa13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 NCBP1Q09161 790 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-204ENST00000564664 SMC1AQ14683 1233 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms