RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 TLL1O43897 1013 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 YEATS4O95619 227 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 MARCKSP29966 332 aaPredicted RBP19.22■□□□□ 0.67
USB1-209ENST00000564387 PTENP60484 403 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 PCBP1Q15365 356 aaKnown RBP eCLIP19.22■□□□□ 0.67
USB1-209ENST00000564387 Q7L0L9 218 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 RNF149Q8NC42 400 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 ZNF689Q96CS4 500 aaPredicted RBP19.22■□□□□ 0.67
USB1-209ENST00000564387 NLRP4Q96MN2 994 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 ADAM2Q99965 735 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 TRAIPQ9BWF2 469 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 CSRNP2Q9H175 543 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 NKX2-4Q9H2Z4 354 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 ZNF576Q9H609 170 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 MINDY3Q9H8M7 445 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 CHST12Q9NRB3 414 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 C1orf112Q9NSG2 853 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 CDH23Q9H251 3354 aa19.22■□□□□ 0.67
USB1-209ENST00000564387 PPP6R2O75170 966 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 CSDE1O75534 798 aaKnown RBP19.21■□□□□ 0.67
USB1-209ENST00000564387 CA3P07451 260 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 SRGAP2CP0DJJ0 459 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 SFPQP23246 707 aaKnown RBP eCLIP19.21■□□□□ 0.67
USB1-209ENST00000564387 UBA7P41226 1012 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 SARSP49591 514 aaKnown RBP19.21■□□□□ 0.67
USB1-209ENST00000564387 TAP1Q03518 808 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 CEBPZQ03701 1054 aaKnown RBP19.21■□□□□ 0.67
USB1-209ENST00000564387 CAPSQ13938 189 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 C1orf186Q6ZWK4 172 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 SLC24A5Q71RS6 500 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 NPAS4Q8IUM7 802 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 SYT2Q8N9I0 419 aaPredicted RBP19.21■□□□□ 0.67
USB1-209ENST00000564387 SCLT1Q96NL6 688 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 POLR3FQ9H1D9 316 aaPredicted RBP19.21■□□□□ 0.67
USB1-209ENST00000564387 SLC28A3Q9HAS3 691 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 GPRC5CQ9NQ84 441 aa19.21■□□□□ 0.67
USB1-209ENST00000564387 TRANK1O15050 2925 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 ARHGEF15O94989 841 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 DDIT3P35638 169 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 TFDP1Q14186 410 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 RINT1Q6NUQ1 792 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 USP49Q70CQ1 688 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 KRI1Q8N9T8 703 aaKnown RBP19.2■□□□□ 0.66
USB1-209ENST00000564387 LRRC15Q8TF66 581 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 EPSTI1Q96J88 318 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 ZBED2Q9BTP6 218 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 ELAC1Q9H777 363 aaKnown RBP19.2■□□□□ 0.66
USB1-209ENST00000564387 BLOC1S4Q9NUP1 217 aa19.2■□□□□ 0.66
USB1-209ENST00000564387 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
USB1-209ENST00000564387 DENND3A2RUS2 1198 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 LCHNA4D1U4 455 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 SPTLC2O15270 562 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 DGKIO75912 1065 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 FGFR4P22455 802 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 GUCY2CP25092 1073 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 PHKA2P46019 1235 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 SLC12A3P55017 1021 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 FOXD4L5Q5VV16 416 aaPredicted RBP19.19■□□□□ 0.66
USB1-209ENST00000564387 CDCA2Q69YH5 1023 aaPredicted RBP19.19■□□□□ 0.66
USB1-209ENST00000564387 FOXD4L4Q8WXT5 416 aaPredicted RBP19.19■□□□□ 0.66
USB1-209ENST00000564387 KIFAP3Q92845 792 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 CALML4Q96GE6 196 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 GUCD1Q96NT3 240 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 CLIC6Q96NY7 704 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 RUSC1Q9BVN2 902 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 TIPINQ9BVW5 301 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 AGPAT5Q9NUQ2 364 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 RNF216Q9NWF9 866 aaPredicted RBP19.19■□□□□ 0.66
USB1-209ENST00000564387 KCND2Q9NZV8 630 aa19.19■□□□□ 0.66
USB1-209ENST00000564387 A0A0U1RQF3 1178 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 UPP2O95045 317 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 STAG3L1P0CL83 205 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 ZSCAN20P17040 1043 aaPredicted RBP19.18■□□□□ 0.66
USB1-209ENST00000564387 HOXA11P31270 313 aaPredicted RBP19.18■□□□□ 0.66
USB1-209ENST00000564387 MBTD1Q05BQ5 628 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 MAPK7Q13164 816 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 KARSQ15046 597 aaKnown RBP19.18■□□□□ 0.66
USB1-209ENST00000564387 AMHR2Q16671 573 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 FAM102BQ5T8I3 360 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 PPP2R2DQ66LE6 453 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 FAM117BQ6P1L5 589 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 DAW1Q8N136 415 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 BSNDQ8WZ55 320 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 SYMPKQ92797 1274 aaKnown RBP19.18■□□□□ 0.66
USB1-209ENST00000564387 CDK5RAP3Q96JB5 506 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 TMEM161AQ9NX61 479 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 RCOR1Q9UKL0 485 aa19.18■□□□□ 0.66
USB1-209ENST00000564387 LINC01553A4QN01 128 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 LINC00271P0C7V0 271 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 PLA2G4BP0C869 781 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 PLCG1P19174 1290 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 NAMPTP43490 491 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 GRIN2CQ14957 1233 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 STK38Q15208 465 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 SPECC1Q5M775 1068 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 MAEAQ7L5Y9 396 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 CATSPER4Q7RTX7 472 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 ZNF598Q86UK7 904 aaKnown RBP19.17■□□□□ 0.66
USB1-209ENST00000564387 PLIN2Q99541 437 aa19.17■□□□□ 0.66
USB1-209ENST00000564387 DACT1Q9NYF0 836 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms