RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	CISD2	Q8N5K1	135 aa	Known RBP	7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	OR2W6P	Q8NHA6	318 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	POLR3GL	Q9BT43	218 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	EPB41L1	Q9H4G0	881 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	RC3H2	Q9HBD1	1191 aa	Known RBP	7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	FBLN5	Q9UBX5	448 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CBLC	Q9ULV8	474 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	ABT1	Q9ULW3	272 aa	Known RBP	7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CTNND2	Q9UQB3	1225 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	SCN7A	Q01118	1682 aa		7.6	□□□□□ -1.19
HERPUD1-208	ENST00000563911	HEG1	Q9ULI3	1381 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CBX4	O00257	560 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	NTRK1	P04629	796 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	PDE6A	P16499	860 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	KRT15	P19012	456 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CDK11B	P21127	795 aa	Known RBP	7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	IL6ST	P40189	918 aa	Predicted RBP	7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	GALK1	P51570	392 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	LRP8	Q14114	963 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	DHCR24	Q15392	516 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	ZNF790	Q6PG37	636 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CABP7	Q86V35	215 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	OSTM1	Q86WC4	334 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	KIF18B	Q86Y91	864 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	RPUSD2	Q8IZ73	545 aa	Known RBP	7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	NXPE1	Q8N323	547 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	C2orf69	Q8N8R5	385 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	CNBD1	Q8NA66	436 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	PRPF38A	Q8NAV1	312 aa	Known RBP	7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	USP7	Q93009	1102 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	SP110	Q9HB58	689 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	ZKSCAN5	Q9Y2L8	839 aa		7.59	□□□□□ -1.19
HERPUD1-208	ENST00000563911	ARFGEF2	Q9Y6D5	1785 aa		7.59	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SCO2	A0A1W2PP80	73 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	GAS7	O60861	476 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	EFEMP2	O95967	443 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ARL4A	P40617	200 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	IARS	P41252	1262 aa	Known RBP	7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	CDKN1C	P49918	316 aa	Predicted RBP	7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SNX17	Q15036	470 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	HLF	Q16534	295 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	CCDC93	Q567U6	631 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	EP400NL	Q6ZTU2	488 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	OTOP3	Q7RTS5	596 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	NLRX1	Q86UT6	975 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	MORC1	Q86VD1	984 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	RIOX2	Q8IUF8	465 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	CHST14	Q8NCH0	376 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ORAI3	Q9BRQ5	295 aa		7.58	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SHTN1	A0MZ66	631 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PTPDC1	A2A3K4	754 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ZNF891	A8MT65	544 aa	Predicted RBP	7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	STARD3NL	O95772	234 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	F2	P00734	622 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	NPR1	P16066	1061 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PNLIP	P16233	465 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	LACTB	P83111	547 aa	Predicted RBP	7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	GPR19	Q15760	415 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ARHGAP36	Q6ZRI8	547 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SAPCD2	Q86UD0	394 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PNMA8A	Q86V59	439 aa	Predicted RBP	7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	GPC2	Q8N158	579 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ABHD4	Q8TB40	342 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PIP4K2C	Q8TBX8	421 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	TTC1	Q99614	292 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	B4GALT6	Q9UBX8	382 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	CASP8AP2	Q9UKL3	1982 aa		7.57	□□□□□ -1.2
HERPUD1-208	ENST00000563911	KRIT1	O00522	736 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	NKRF	O15226	690 aa	Known RBP eCLIP	7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	EYA4	O95677	639 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	AFM	P43652	599 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SOX10	P56693	466 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	JAM2	P57087	298 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	IL2	P60568	153 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	CIAPIN1	Q6FI81	312 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	NBPF5P	Q86XG9	351 aa	Predicted RBP	7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ABI1	Q8IZP0	508 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PHACTR3	Q96KR7	559 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	GLIS2	Q9BZE0	524 aa	Predicted RBP	7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	IFT22	Q9H7X7	185 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SLC6A20	Q9NP91	592 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	CRTAC1	Q9NQ79	661 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	HOMER2	Q9NSB8	354 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ABCC12	Q96J65	1359 aa		7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SIPA1L3	O60292	1781 aa	Predicted RBP	7.56	□□□□□ -1.2
HERPUD1-208	ENST00000563911	BRINP1	O60477	761 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	GLI4	P10075	376 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	MAP2K2	P36507	400 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	MECP2	P51608	486 aa	Known RBP	7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	ARHGAP44	Q17R89	818 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	STEAP3	Q658P3	488 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	PTRH1	Q86Y79	214 aa	Known RBP	7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	RTKN2	Q8IZC4	609 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	WDR66	Q8TBY9	1149 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SHISA4	Q96DD7	197 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	SMURF1	Q9HCE7	757 aa		7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	THG1L	Q9NWX6	298 aa	Known RBP	7.55	□□□□□ -1.2
HERPUD1-208	ENST00000563911	DDX56	Q9NY93	547 aa	Known RBP	7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms