RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 ARL2P36404 184 aa24.13■■□□□ 1.45
LINC01960-201ENST00000563759 MTIF2P46199 727 aaKnown RBP24.13■■□□□ 1.45
LINC01960-201ENST00000563759 CACNB2Q08289 660 aaPredicted RBP24.13■■□□□ 1.45
LINC01960-201ENST00000563759 ARHGEF6Q15052 776 aa24.13■■□□□ 1.45
LINC01960-201ENST00000563759 ASAP3Q8TDY4 903 aa24.13■■□□□ 1.45
LINC01960-201ENST00000563759 HVCN1Q96D96 273 aa24.13■■□□□ 1.45
LINC01960-201ENST00000563759 NTPCRQ9BSD7 190 aaKnown RBP24.13■■□□□ 1.45
LINC01960-201ENST00000563759 BEGAINQ9BUH8 593 aa24.13■■□□□ 1.45
LINC01960-201ENST00000563759 DENND3A2RUS2 1198 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 CETN3O15182 167 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 NR3C1P04150 777 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 TPM2P07951 284 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 PRKAR2AP13861 404 aaKnown RBP24.12■■□□□ 1.45
LINC01960-201ENST00000563759 GLRA2P23416 452 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 RPL13P26373 211 aaKnown RBP24.12■■□□□ 1.45
LINC01960-201ENST00000563759 NAMPTP43490 491 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 COPB1P53618 953 aaKnown RBP24.12■■□□□ 1.45
LINC01960-201ENST00000563759 CHMP4BP1P59074 171 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 ADAM9Q13443 819 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 LRRC71Q8N4P6 559 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 GOLGA5Q8TBA6 731 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 VPS16Q9H269 839 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 ADGRA3Q8IWK6 1321 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 HTTP42858 3142 aa24.12■■□□□ 1.45
LINC01960-201ENST00000563759 LRRIQ4A6NIV6 560 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 N4BP3O15049 544 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 SEPT4O43236 478 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 TGFB1I1O43294 461 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 F2P00734 622 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 HMGCRP04035 888 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 PRKCSHP14314 528 aaPredicted RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 IRX5P78411 483 aaPredicted RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 BEX3Q00994 111 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 PPFIA1Q13136 1202 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 FSCN1Q16658 493 aaKnown RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 IER5Q5VY09 327 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 METTL13Q8N6R0 699 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 RETREG2Q8NC44 543 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 PSPC1Q8WXF1 523 aaKnown RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 TUBGCP2Q9BSJ2 902 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 IKZF4Q9H2S9 585 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 INTS13Q9NVM9 706 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 EXOC7Q9UPT5 735 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 IGKV6-21A0A0C4DH24 114 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 PES1O00541 588 aaKnown RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 MYL3P08590 195 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 C6orf222P0C671 652 aaPredicted RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 ABCD1P33897 745 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 DRP2Q13474 957 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 CCDC40Q4G0X9 1142 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 ZC3H3Q8IXZ2 948 aaKnown RBP24.11■■□□□ 1.45
LINC01960-201ENST00000563759 DEPTORQ8TB45 409 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 TBX20Q9UMR3 447 aa24.11■■□□□ 1.45
LINC01960-201ENST00000563759 LRRC10BA6NIK2 292 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 CLIC2O15247 247 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 C22orf31O95567 290 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 GNA14O95837 355 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 RARBP10826 455 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 DNM2P50570 870 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 MAP2K1Q02750 393 aaPredicted RBP24.1■■□□□ 1.45
LINC01960-201ENST00000563759 TMC6Q7Z403 805 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 SPC25Q9HBM1 224 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 AGPAT3Q9NRZ7 376 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 ARHGAP28Q9P2N2 729 aa24.1■■□□□ 1.45
LINC01960-201ENST00000563759 TRIP12Q14669 1992 aaPredicted RBP24.1■■□□□ 1.45
LINC01960-201ENST00000563759 MXD4Q14582 209 aaPredicted RBP24.09■■□□□ 1.45
LINC01960-201ENST00000563759 NR1I3Q14994 352 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 KIAA0753Q2KHM9 967 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 EFCAB12Q6NXP0 572 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 FILIP1Q7Z7B0 1213 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 MAP4K3Q8IVH8 894 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 PRPF31Q8WWY3 499 aaKnown RBP24.09■■□□□ 1.45
LINC01960-201ENST00000563759 RTN4Q9NQC3 1192 aaKnown RBP24.09■■□□□ 1.45
LINC01960-201ENST00000563759 TSKSQ9UJT2 592 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 MAGEB2O15479 319 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 HSPA6P17066 643 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 CAPSQ13938 189 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 GRIK4Q16099 956 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 ZBTB10Q96DT7 871 aa24.09■■□□□ 1.45
LINC01960-201ENST00000563759 SCP2P22307 547 aa24.08■■□□□ 1.45
LINC01960-201ENST00000563759 KLRC1P26715 233 aa24.08■■□□□ 1.45
LINC01960-201ENST00000563759 CCND3P30281 292 aaPredicted RBP24.08■■□□□ 1.45
LINC01960-201ENST00000563759 CLCN3P51790 818 aa24.08■■□□□ 1.45
LINC01960-201ENST00000563759 GJA9P57773 515 aa24.08■■□□□ 1.45
LINC01960-201ENST00000563759 NFIL3Q16649 462 aa24.08■■□□□ 1.45
LINC01960-201ENST00000563759 CEP135Q66GS9 1140 aa24.08■■□□□ 1.45
LINC01960-201ENST00000563759 NOC4LQ9BVI4 516 aaKnown RBP24.08■■□□□ 1.45
LINC01960-201ENST00000563759 SUCLA2Q9P2R7 463 aaPredicted RBP24.08■■□□□ 1.45
LINC01960-201ENST00000563759 LAMTOR4Q0VGL1 99 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 MKRN4PQ13434 485 aaPredicted RBP24.07■■□□□ 1.44
LINC01960-201ENST00000563759 MFSD10Q14728 455 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 PTPN21Q16825 1174 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 VSTM4Q8IW00 320 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 PXYLP1Q8TE99 480 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 KAT2BQ92831 832 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 KATNAL1Q9BW62 490 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 CGNQ9P2M7 1197 aaKnown RBP24.07■■□□□ 1.44
LINC01960-201ENST00000563759 FRMPD3Q5JV73 1810 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 LGALS16A8MUM7 142 aa24.07■■□□□ 1.44
LINC01960-201ENST00000563759 TEX33O43247 280 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms