RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 C10orf76Q5T2E6 689 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 GJB7Q6PEY0 223 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 CYP2W1Q8TAV3 490 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 DEPTORQ8TB45 409 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 ANKS1AQ92625 1134 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 SEC16BQ96JE7 1060 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 EDEM3Q9BZQ6 932 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 C1orf112Q9NSG2 853 aa11.27□□□□□ -0.6
RNF40-204ENST00000563683 SEPT9Q9UHD8 586 aaPredicted RBP11.27□□□□□ -0.6
RNF40-204ENST00000563683 TPX2Q9ULW0 747 aaKnown RBP11.27□□□□□ -0.6
RNF40-204ENST00000563683 SLC16A4O15374 487 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 IFNB1P01574 187 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 ASNSP08243 561 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 RXRBP28702 533 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 ECE1P42892 770 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 SCTRP47872 440 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 PSMC6P62333 389 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 PTK2Q05397 1052 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 XRCC4Q13426 336 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 TRPC3Q13507 836 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 LIN9Q5TKA1 542 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 TTLL6Q8N841 843 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 PIK3R5Q8WYR1 880 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 GLG1Q92896 1179 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 NT5C1BQ96P26 610 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 KDM4CQ9H3R0 1056 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 TAF1DQ9H5J8 278 aaPredicted RBP11.27□□□□□ -0.61
RNF40-204ENST00000563683 RASSF10A6NK89 507 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 PDXKO00764 312 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 EYA4O95677 639 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 KRT19P08727 400 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 FGRP09769 529 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 SLCO1A2P46721 670 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 CAPN12Q6ZSI9 719 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.61
RNF40-204ENST00000563683 TMEM206Q9H813 350 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 FBXO28Q9NVF7 368 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 AMACRQ9UHK6 382 aa11.27□□□□□ -0.61
RNF40-204ENST00000563683 DNAJC8O75937 253 aaPredicted RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 RPA1P27694 616 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 IFNAR2P48551 515 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 MTMR1Q13613 665 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 SLMAPQ14BN4 828 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 E2F5Q15329 346 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 NPY5RQ15761 445 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 AGBL2Q5U5Z8 902 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 KLHDC7AQ5VTJ3 777 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 ANKRD35Q8N283 1001 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 ANKRD42Q8N9B4 389 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 CASKIN2Q8WXE0 1202 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 NOVA2Q9UNW9 492 aaKnown RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 IKBKGQ9Y6K9 419 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 NOP56O00567 594 aaKnown RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 ATP2A1O14983 1001 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 SHMT1P34896 483 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 CASP4P49662 377 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 POLGP54098 1239 aaPredicted RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 MFAP3P55082 362 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 PPP2R2AP63151 447 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 FRMD5Q7Z6J6 570 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 FAM160B2Q86V87 743 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 CCHCR1Q8TD31 782 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 ACER1Q8TDN7 264 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 PRMT6Q96LA8 375 aaPredicted RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 RMDN3Q96TC7 470 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 AGTPBP1Q9UPW5 1226 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 SNX24Q9Y343 169 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 KCPQ6ZWJ8 1503 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 HOXA7P31268 230 aaPredicted RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 ADCY1Q08828 1119 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 TAB3Q8N5C8 712 aaPredicted RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 C4orf32Q8N8J7 132 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 HVCN1Q96D96 273 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 PLCD4Q9BRC7 762 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 PACSIN1Q9BY11 444 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 OSBPL7Q9BZF2 842 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 ISCUQ9H1K1 167 aa11.26□□□□□ -0.61
RNF40-204ENST00000563683 CNOT10Q9H9A5 744 aaKnown RBP11.26□□□□□ -0.61
RNF40-204ENST00000563683 BRD2P25440 801 aaKnown RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 ADCY8P40145 1251 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 GNPTABQ3T906 1256 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 MTERF2Q49AM1 385 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 KAZNQ674X7 775 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 EEPD1Q7L9B9 569 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 LRRC4BQ9NT99 713 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 DNAJC17Q9NVM6 304 aaKnown RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 C5orf60A6NFR6 353 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 MSH4O15457 936 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 HIP1RO75146 1068 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 GAS8O95995 478 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 ATF7P17544 494 aaPredicted RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 UAP1Q16222 522 aaPredicted RBP11.25□□□□□ -0.61
RNF40-204ENST00000563683 MIIPQ5JXC2 388 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 ARHGAP27Q6ZUM4 889 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 SCFD1Q8WVM8 642 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 SHISA4Q96DD7 197 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 SAAL1Q96ER3 474 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
RNF40-204ENST00000563683 TIAM2Q8IVF5 1701 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms