RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 UBL4BQ8N7F7 174 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 TACO1Q9BSH4 297 aaKnown RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 SEMA4AQ9H3S1 761 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 VEZTQ9HBM0 779 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 IRAK4Q9NWZ3 460 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 IGSF9BQ9UPX0 1349 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 ATMINO43313 823 aaPredicted RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 GDF11O95390 407 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 EIF3BP55884 814 aaKnown RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 MYL7Q01449 175 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 ODR4Q5SWX8 454 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 EPS8L3Q8TE67 593 aaKnown RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 TBC1D22AQ8WUA7 517 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 TATDN2Q93075 761 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 NSRP1Q9H0G5 558 aaKnown RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 UBE2TQ9NPD8 197 aaPredicted RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.36
ABCA3-203ENST00000563623 ZBTB21Q9ULJ3 1066 aa12.77□□□□□ -0.36
ABCA3-203ENST00000563623 EEF2P13639 858 aaKnown RBP12.77□□□□□ -0.37
ABCA3-203ENST00000563623 DRP2Q13474 957 aa12.77□□□□□ -0.37
ABCA3-203ENST00000563623 TRIP13Q15645 432 aaPredicted RBP12.77□□□□□ -0.37
ABCA3-203ENST00000563623 NSMFQ6X4W1 530 aa12.77□□□□□ -0.37
ABCA3-203ENST00000563623 FBXO11Q86XK2 927 aa12.77□□□□□ -0.37
ABCA3-203ENST00000563623 ZC3H12CQ9C0D7 883 aaKnown RBP12.77□□□□□ -0.37
ABCA3-203ENST00000563623 SH3BP1Q9Y3L3 701 aa12.77□□□□□ -0.37
ABCA3-203ENST00000563623 MYH1P12882 1939 aa12.77□□□□□ -0.37
ABCA3-203ENST00000563623 MYH4Q9Y623 1939 aa12.77□□□□□ -0.37
ABCA3-203ENST00000563623 RASGRF2O14827 1237 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 CALCOCO2Q13137 446 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 PPP1R18Q6NYC8 613 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 FAM196AQ6ZSG2 479 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 PHLDB2Q86SQ0 1253 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 GDAP1Q8TB36 358 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 ASIC3Q9UHC3 531 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 CCT8L1PA6NM43 557 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 FTLP02792 175 aaPredicted RBP12.76□□□□□ -0.37
ABCA3-203ENST00000563623 DRD4P21917 467 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
ABCA3-203ENST00000563623 FMO5P49326 533 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 AMIGO3Q86WK7 504 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 CCDC50Q8IVM0 306 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 SYT2Q8N9I0 419 aaPredicted RBP12.76□□□□□ -0.37
ABCA3-203ENST00000563623 EIF2AK1Q9BQI3 630 aaKnown RBP12.76□□□□□ -0.37
ABCA3-203ENST00000563623 INTS2Q9H0H0 1204 aaKnown RBP12.76□□□□□ -0.37
ABCA3-203ENST00000563623 ALG6Q9Y672 507 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 GSTTP1A0A1W2PQM5 241 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 ELF1P32519 619 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 GJC1P36383 396 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 MARSP56192 900 aaKnown RBP12.76□□□□□ -0.37
ABCA3-203ENST00000563623 PALB2Q86YC2 1186 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 SLC20A1Q8WUM9 679 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 NGLY1Q96IV0 654 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 AMNQ9BXJ7 453 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 TRAF3IP3Q9Y228 551 aa12.76□□□□□ -0.37
ABCA3-203ENST00000563623 CES2O00748 559 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 RPA1P27694 616 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 MARCKSL1P49006 195 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 BYSLQ13895 437 aaKnown RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 NBPF20Q3BBV1 942 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 C6orf89Q6UWU4 347 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 THOC1Q96FV9 657 aaKnown RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 DYDC2Q96IM9 177 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 C8orf37Q96NL8 207 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 POLLQ9UGP5 575 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 TBK1Q9UHD2 729 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 ASTN1O14525 1302 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 FOXN3O00409 490 aaPredicted RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 RASSF9O75901 435 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 PEX19P40855 299 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 CETN1Q12798 172 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 ARMC9Q7Z3E5 817 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 ALG3Q92685 438 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 KRT35Q92764 455 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 RBM17Q96I25 401 aaKnown RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 BTBD6Q96KE9 485 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 GLT8D2Q9H1C3 349 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 PABPC3Q9H361 631 aaKnown RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 MTUS1Q9ULD2 1270 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 THRAP3Q9Y2W1 955 aaKnown RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 HOXD13P35453 343 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 PRKCIP41743 596 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 PTENP60484 403 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 NFIAQ12857 509 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 MYO1EQ12965 1108 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 PLCB4Q15147 1175 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 LONRF1Q17RB8 773 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
ABCA3-203ENST00000563623 HES6Q96HZ4 224 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 SH2D3AQ9BRG2 576 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 STK33Q9BYT3 514 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 SIX2Q9NPC8 291 aa12.75□□□□□ -0.37
ABCA3-203ENST00000563623 FAM86B1E9PN63 330 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 EML1O00423 815 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 FAM86B2P0C5J1 330 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 TMEM253P0C7T8 217 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 CBWD6Q4V339 395 aa12.74□□□□□ -0.37
ABCA3-203ENST00000563623 CBWD3Q5JTY5 395 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 1114 ms