RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 SRGAP2CP0DJJ0 459 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 SFPQP23246 707 aaKnown RBP eCLIP18.55■□□□□ 0.56
CLK3-207ENST00000562389 DNAJB2P25686 324 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 TXLNAP40222 546 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 CAPSQ13938 189 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 FAM102BQ5T8I3 360 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 USP49Q70CQ1 688 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 MAEAQ7L5Y9 396 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 SRGAP1Q7Z6B7 1085 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 IFNLR1Q8IU57 520 aaPredicted RBP18.55■□□□□ 0.56
CLK3-207ENST00000562389 MYOCDQ8IZQ8 938 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 SYT2Q8N9I0 419 aaPredicted RBP18.55■□□□□ 0.56
CLK3-207ENST00000562389 RASSF8Q8NHQ8 419 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 NFKBIZQ9BYH8 718 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 PCDHA11Q9Y5I1 949 aa18.55■□□□□ 0.56
CLK3-207ENST00000562389 TMEM265A0A087WTH1 108 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 MGEA5O60502 916 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 PLA2G4BP0C869 781 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 PLCG1P19174 1290 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 ANP32AP39687 249 aaKnown RBP18.54■□□□□ 0.56
CLK3-207ENST00000562389 PBX2P40425 430 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 PHKA2P46019 1235 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 RABGGTBP53611 331 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 SLC12A3P55017 1021 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 PTENP60484 403 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 NUCB2P80303 420 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 DSC3Q14574 896 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 RINT1Q6NUQ1 792 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 C1orf186Q6ZWK4 172 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 RTN4RL1Q86UN2 441 aaPredicted RBP18.54■□□□□ 0.56
CLK3-207ENST00000562389 LRRC15Q8TF66 581 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 TOP1MTQ969P6 601 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 RUSC1Q9BVN2 902 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 TIPINQ9BVW5 301 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 C1orf112Q9NSG2 853 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 BLOC1S4Q9NUP1 217 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 KCND2Q9NZV8 630 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 CCDC39Q9UFE4 941 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 MSRAQ9UJ68 235 aa18.54■□□□□ 0.56
CLK3-207ENST00000562389 MYH11P35749 1972 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 CUTAO60888 179 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 CSDE1O75534 798 aaKnown RBP18.53■□□□□ 0.56
CLK3-207ENST00000562389 FGFR4P22455 802 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 KRT85P78386 507 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 PCBP1Q15365 356 aaKnown RBP eCLIP18.53■□□□□ 0.56
CLK3-207ENST00000562389 TMCO2Q7Z6W1 182 aaPredicted RBP18.53■□□□□ 0.56
CLK3-207ENST00000562389 RAD54LQ92698 747 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 KIFAP3Q92845 792 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 ADAM2Q99965 735 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 RGS18Q9NS28 235 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 YBX2Q9Y2T7 364 aaKnown RBP18.53■□□□□ 0.56
CLK3-207ENST00000562389 COL4A6Q14031 1691 aa18.53■□□□□ 0.56
CLK3-207ENST00000562389 DENND3A2RUS2 1198 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 TLL1O43897 1013 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 GUCY2CP25092 1073 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 CDCA2Q69YH5 1023 aaPredicted RBP18.52■□□□□ 0.56
CLK3-207ENST00000562389 CATSPER4Q7RTX7 472 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 BSNDQ8WZ55 320 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 TIFAQ96CG3 184 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 ZBED2Q9BTP6 218 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 MINDY3Q9H8M7 445 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 CHST12Q9NRB3 414 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 STK17AQ9UEE5 414 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 RCOR1Q9UKL0 485 aa18.52■□□□□ 0.56
CLK3-207ENST00000562389 C9IYK1 514 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 HIP1RO75146 1068 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 SSBP05455 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
CLK3-207ENST00000562389 ZSCAN20P17040 1043 aaPredicted RBP18.51■□□□□ 0.55
CLK3-207ENST00000562389 NAMPTP43490 491 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 SARSP49591 514 aaKnown RBP18.51■□□□□ 0.55
CLK3-207ENST00000562389 HTRA4P83105 476 aaPredicted RBP18.51■□□□□ 0.55
CLK3-207ENST00000562389 PPP2R5AQ15172 486 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 AXDND1Q5T1B0 1012 aaPredicted RBP18.51■□□□□ 0.55
CLK3-207ENST00000562389 SLC24A5Q71RS6 500 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 NPAS4Q8IUM7 802 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 CRIPAKQ8N1N5 446 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 LARP4BQ92615 738 aaKnown RBP18.51■□□□□ 0.55
CLK3-207ENST00000562389 DRC1Q96MC2 740 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 RAD9AQ99638 391 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 NKX2-4Q9H2Z4 354 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 AGPAT5Q9NUQ2 364 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 PCDHA7Q9UN72 937 aa18.51■□□□□ 0.55
CLK3-207ENST00000562389 LRRIQ4A6NIV6 560 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 UPP2O95045 317 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 MYOGP15173 224 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 ME1P48163 572 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 MBTD1Q05BQ5 628 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 MAPK7Q13164 816 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 MCM6Q14566 821 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 ZNF697Q5TEC3 545 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 RRAGBQ5VZM2 374 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 FAM117BQ6P1L5 589 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 CCDC73Q6ZRK6 1079 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 DAW1Q8N136 415 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 LEO1Q8WVC0 666 aaPredicted RBP18.5■□□□□ 0.55
CLK3-207ENST00000562389 IFT74Q96LB3 600 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 C2orf40Q9H1Z8 148 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 C17orf75Q9HAS0 396 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 RNF216Q9NWF9 866 aaPredicted RBP18.5■□□□□ 0.55
CLK3-207ENST00000562389 DACT1Q9NYF0 836 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms