RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 PRMT6Q96LA8 375 aaPredicted RBP11.91□□□□□ -0.5
NEIL1-202ENST00000561643 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.91□□□□□ -0.5
NEIL1-202ENST00000561643 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.91□□□□□ -0.5
NEIL1-202ENST00000561643 FRMD4BQ9Y2L6 1034 aa11.91□□□□□ -0.5
NEIL1-202ENST00000561643 KRIT1O00522 736 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
NEIL1-202ENST00000561643 SOX5P35711 763 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 FMO5P49326 533 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 ERVK-9P63128 1117 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 PPARDQ03181 441 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 ODR4Q5SWX8 454 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 CEP85LQ5SZL2 805 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 B4GALNT4Q76KP1 1039 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 ACER1Q8TDN7 264 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 SCFD2Q8WU76 684 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 DDX47Q9H0S4 455 aaKnown RBP11.9□□□□□ -0.5
NEIL1-202ENST00000561643 DNAJC12Q9UKB3 198 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 ATRNL1Q5VV63 1379 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 FAM170AA1A519 330 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 TCP10L2B9ZVM9 353 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 H0YIN7 160 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 GALCP54803 685 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 PPP2R5CQ13362 524 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 DRAP1Q14919 205 aaPredicted RBP11.9□□□□□ -0.5
NEIL1-202ENST00000561643 SLC15A2Q16348 729 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 GLYCTKQ8IVS8 523 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 PROCA1Q8NCQ7 364 aaPredicted RBP11.9□□□□□ -0.5
NEIL1-202ENST00000561643 ISCUQ9H1K1 167 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 SEPT11Q9NVA2 429 aaKnown RBP11.9□□□□□ -0.5
NEIL1-202ENST00000561643 TMOD2Q9NZR1 351 aa11.9□□□□□ -0.5
NEIL1-202ENST00000561643 A0A0A6YYK5 440 aaPredicted RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 F8VZ95 297 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SART1O43290 800 aaKnown RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 TRIM49P0CI25 452 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 TRIM49CP0CI26 452 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 ABCB4P21439 1286 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CLNS1AP54105 237 aaKnown RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SYCP3Q8IZU3 236 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SLC5A5Q92911 643 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 NACC1Q96RE7 527 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 ZNF577Q9BSK1 485 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 EHMT1Q9H9B1 1298 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 GOPCQ9HD26 462 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 INTUQ9ULD6 942 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 NENFQ9UMX5 172 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CLSTN1O94985 981 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 LMNB1P20700 586 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SKOR1P84550 965 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 PLS1Q14651 629 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 E2F5Q15329 346 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 ZYXQ15942 572 aaKnown RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 KIAA1755Q5JYT7 1200 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 ZNF720Q7Z2F6 126 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 LNX1Q8TBB1 728 aaPredicted RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 TACO1Q9BSH4 297 aaKnown RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 STK33Q9BYT3 514 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SUCLA2Q9P2R7 463 aaPredicted RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SEL1LQ9UBV2 794 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 AMFRQ9UKV5 643 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 PLAAQ9Y263 795 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 FRMPD4Q14CM0 1322 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 GOLGA6L10A6NI86 522 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CUL1Q13616 776 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CBWD6Q4V339 395 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CBWD3Q5JTY5 395 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CBWD5Q5RIA9 395 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 DDX42Q86XP3 938 aaKnown RBP eCLIP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 RDH13Q8NBN7 331 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 CTNNBL1Q8WYA6 563 aaPredicted RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 AGPAT3Q9NRZ7 376 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 HERC5Q9UII4 1024 aaKnown RBP11.89□□□□□ -0.51
NEIL1-202ENST00000561643 SCN9AQ15858 1988 aa11.89□□□□□ -0.51
NEIL1-202ENST00000561643 COL11A2P13942 1736 aaPredicted RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 CLRN2A0PK11 232 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 A6NNZ2 444 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 CCDC188H7C350 402 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 EXOC3O60645 756 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 INHBEP58166 350 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 ARHGAP44Q17R89 818 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 TUBB8Q3ZCM7 444 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 SLFN11Q7Z7L1 901 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 NT5DC3Q86UY8 548 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 THOC1Q96FV9 657 aaKnown RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 WDR11Q9BZH6 1224 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 UNC45AQ9H3U1 944 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 OSGEPQ9NPF4 335 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 ARHGEF35A5YM69 484 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 DDX39AO00148 427 aaKnown RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 ARP10275 920 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
NEIL1-202ENST00000561643 PEX19P40855 299 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 MYL7Q01449 175 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 NFIL3Q16649 462 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 CHURC1Q8WUH1 139 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 SCLT1Q96NL6 688 aa11.88□□□□□ -0.51
NEIL1-202ENST00000561643 LXNQ9BS40 222 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms