RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 IRAK3Q9Y616 596 aa9.48□□□□□ -0.89
PALB2-202ENST00000561514 GVINP1Q7Z2Y8 2422 aa9.48□□□□□ -0.89
PALB2-202ENST00000561514 RIF1Q5UIP0 2472 aaKnown RBP9.47□□□□□ -0.89
PALB2-202ENST00000561514 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 CPA1P15085 419 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 RPS6KB1P23443 525 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 NUBP1P53384 320 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 CDC42EP1Q00587 391 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 TCF15Q12870 199 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 NPY5RQ15761 445 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 SPOUT1Q5T280 376 aaKnown RBP9.47□□□□□ -0.89
PALB2-202ENST00000561514 PLPP4Q5VZY2 271 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 Q6ZUG5 572 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 SKAP1Q86WV1 359 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 LRRC71Q8N4P6 559 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 MRPL43Q8N983 215 aaKnown RBP9.47□□□□□ -0.89
PALB2-202ENST00000561514 DAGLBQ8NCG7 672 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 ETNPPLQ8TBG4 499 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 MICAL1Q8TDZ2 1067 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 PHKBQ93100 1093 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 NECTIN4Q96NY8 510 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 PPP1R16BQ96T49 567 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 MRPL9Q9BYD2 267 aaKnown RBP9.47□□□□□ -0.89
PALB2-202ENST00000561514 C22orf23Q9BZE7 217 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 UNC45AQ9H3U1 944 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 NRBP2Q9NSY0 501 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 DACT1Q9NYF0 836 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 SPG21Q9NZD8 308 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 AKT3Q9Y243 479 aa9.47□□□□□ -0.89
PALB2-202ENST00000561514 FNDC1Q4ZHG4 1894 aaPredicted RBP9.47□□□□□ -0.89
PALB2-202ENST00000561514 C2orf71A6NGG8 1288 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 GAS7O60861 476 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 ZNF623O75123 536 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 ZSCAN20P17040 1043 aaPredicted RBP9.46□□□□□ -0.9
PALB2-202ENST00000561514 PDIA3P30101 505 aaKnown RBP9.46□□□□□ -0.9
PALB2-202ENST00000561514 PBX3P40426 434 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 TECP42680 631 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 KRT17Q04695 432 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 ITIH3Q06033 890 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 TBC1D8BQ0IIM8 1120 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 DRP2Q13474 957 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 SMC1AQ14683 1233 aaKnown RBP9.46□□□□□ -0.9
PALB2-202ENST00000561514 XKR3Q5GH77 459 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 IER5LQ5T953 404 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 ZNF410Q86VK4 478 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 CASP10Q92851 521 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 PBXIP1Q96AQ6 731 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 RPGRIP1Q96KN7 1286 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 JAKMIP1Q96N16 626 aaKnown RBP9.46□□□□□ -0.9
PALB2-202ENST00000561514 ZBP1Q9H171 429 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 ADAM7Q9H2U9 754 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 ENTPD7Q9NQZ7 604 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 VPS54Q9P1Q0 977 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 HCFC2Q9Y5Z7 792 aa9.46□□□□□ -0.9
PALB2-202ENST00000561514 PLXNA4Q9HCM2 1894 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 CLASP2O75122 1294 aaKnown RBP9.45□□□□□ -0.9
PALB2-202ENST00000561514 MAFO75444 373 aaPredicted RBP9.45□□□□□ -0.9
PALB2-202ENST00000561514 PHKA2P46019 1235 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 POLGP54098 1239 aaPredicted RBP9.45□□□□□ -0.9
PALB2-202ENST00000561514 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 LRCH2Q5VUJ6 765 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 GALNT17Q6IS24 598 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 SUGP1Q8IWZ8 645 aaKnown RBP9.45□□□□□ -0.9
PALB2-202ENST00000561514 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 TBCKQ8TEA7 893 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 TEKT3Q9BXF9 490 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 GCOM2Q9BZD3 368 aaPredicted RBP9.45□□□□□ -0.9
PALB2-202ENST00000561514 PDCL3Q9H2J4 239 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 DZANK1Q9NVP4 752 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 PCDHA4Q9UN74 947 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
PALB2-202ENST00000561514 USP34Q70CQ2 3546 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 INPPL1O15357 1258 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 PAPLNO95428 1278 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 TDP2O95551 362 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 CTSAP10619 480 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 SKIP12755 728 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 IBSPP21815 317 aaPredicted RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 FGFR4P22455 802 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 SFPQP23246 707 aaKnown RBP eCLIP9.44□□□□□ -0.9
PALB2-202ENST00000561514 PSMA5P28066 241 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 RAB27AP51159 221 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 VCPP55072 806 aaKnown RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 BCAR1P56945 870 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 AKAP17AQ02040 695 aaKnown RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 TOB2Q14106 344 aaPredicted RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 KIAA1841Q6NSI8 718 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 MIER3Q7Z3K6 550 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 TMC7Q7Z402 723 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 DDX53Q86TM3 631 aaKnown RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 TMEM173Q86WV6 379 aaPredicted RBP9.44□□□□□ -0.9
PALB2-202ENST00000561514 UBALD2Q8IYN6 164 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 ZDHHC14Q8IZN3 488 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 HELQQ8TDG4 1101 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 SLC22A17Q8WUG5 538 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 NLRP7Q8WX94 980 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 IGSF21Q96ID5 467 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
PALB2-202ENST00000561514 VN1R3Q9BXE9 311 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms