RNA–Protein interactions for RNA: ENST00000561239.6

SHF-210, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3

Gene SHF, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-210ENST00000561239 KRT79Q5XKE5 535 aa15.07■□□□□ 0
SHF-210ENST00000561239 RTN4RL1Q86UN2 441 aaPredicted RBP15.07■□□□□ 0
SHF-210ENST00000561239 FAM228AQ86W67 206 aa15.07■□□□□ 0
SHF-210ENST00000561239 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.07■□□□□ 0
SHF-210ENST00000561239 FBXO22Q8NEZ5 403 aa15.07■□□□□ 0
SHF-210ENST00000561239 TMEM40Q8WWA1 233 aa15.07■□□□□ 0
SHF-210ENST00000561239 ADAM2Q99965 735 aa15.07■□□□□ 0
SHF-210ENST00000561239 TMX1Q9H3N1 280 aa15.07■□□□□ 0
SHF-210ENST00000561239 TFIP11Q9UBB9 837 aaKnown RBP15.07■□□□□ 0
SHF-210ENST00000561239 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
SHF-210ENST00000561239 A0A087WWV3 80 aa15.06■□□□□ 0
SHF-210ENST00000561239 ARHGEF15O94989 841 aa15.06■□□□□ 0
SHF-210ENST00000561239 SFPQP23246 707 aaKnown RBP eCLIP15.06■□□□□ 0
SHF-210ENST00000561239 MARCKSP29966 332 aaPredicted RBP15.06■□□□□ 0
SHF-210ENST00000561239 CEBPZQ03701 1054 aaKnown RBP15.06■□□□□ 0
SHF-210ENST00000561239 BTG3Q14201 252 aaPredicted RBP15.06■□□□□ 0
SHF-210ENST00000561239 KCNK18Q7Z418 384 aa15.06■□□□□ 0
SHF-210ENST00000561239 RHPN2Q8IUC4 686 aa15.06■□□□□ 0
SHF-210ENST00000561239 CMTR2Q8IYT2 770 aaKnown RBP15.06■□□□□ 0
SHF-210ENST00000561239 PSPC1Q8WXF1 523 aaKnown RBP15.06■□□□□ 0
SHF-210ENST00000561239 LINC01599Q8WXQ3 324 aa15.06■□□□□ 0
SHF-210ENST00000561239 ZNF689Q96CS4 500 aaPredicted RBP15.06■□□□□ 0
SHF-210ENST00000561239 CCSER1Q9C0I3 900 aa15.06■□□□□ 0
SHF-210ENST00000561239 CSRNP2Q9H175 543 aa15.06■□□□□ 0
SHF-210ENST00000561239 ELAC1Q9H777 363 aaKnown RBP15.06■□□□□ 0
SHF-210ENST00000561239 DDX19AQ9NUU7 478 aaKnown RBP15.06■□□□□ 0
SHF-210ENST00000561239 DACT1Q9NYF0 836 aa15.06■□□□□ 0
SHF-210ENST00000561239 MTUS1Q9ULD2 1270 aa15.06■□□□□ 0
SHF-210ENST00000561239 KIAA1024Q9UPX6 916 aa15.06■□□□□ 0
SHF-210ENST00000561239 MTCH2Q9Y6C9 303 aa15.06■□□□□ 0
SHF-210ENST00000561239 RBAK-RBAKDNI3L0D1 243 aa15.05■□□□□ -0
SHF-210ENST00000561239 RFXAPO00287 272 aa15.05■□□□□ -0
SHF-210ENST00000561239 SPTLC2O15270 562 aa15.05■□□□□ -0
SHF-210ENST00000561239 HOXA2O43364 376 aa15.05■□□□□ -0
SHF-210ENST00000561239 DGAT1O75907 488 aa15.05■□□□□ -0
SHF-210ENST00000561239 RB1P06400 928 aa15.05■□□□□ -0
SHF-210ENST00000561239 DNM1Q05193 864 aaKnown RBP15.05■□□□□ -0
SHF-210ENST00000561239 EMC2Q15006 297 aa15.05■□□□□ -0
SHF-210ENST00000561239 PTPROQ16827 1216 aa15.05■□□□□ -0
SHF-210ENST00000561239 EPC2Q52LR7 807 aa15.05■□□□□ -0
SHF-210ENST00000561239 USP49Q70CQ1 688 aa15.05■□□□□ -0
SHF-210ENST00000561239 TMEM192Q8IY95 271 aa15.05■□□□□ -0
SHF-210ENST00000561239 KRI1Q8N9T8 703 aaKnown RBP15.05■□□□□ -0
SHF-210ENST00000561239 LRRC15Q8TF66 581 aa15.05■□□□□ -0
SHF-210ENST00000561239 PPM1EQ8WY54 764 aa15.05■□□□□ -0
SHF-210ENST00000561239 MTRQ99707 1265 aa15.05■□□□□ -0
SHF-210ENST00000561239 C17orf80Q9BSJ5 609 aa15.05■□□□□ -0
SHF-210ENST00000561239 CHST12Q9NRB3 414 aa15.05■□□□□ -0
SHF-210ENST00000561239 TMEM161AQ9NX61 479 aa15.05■□□□□ -0
SHF-210ENST00000561239 RCOR1Q9UKL0 485 aa15.05■□□□□ -0
SHF-210ENST00000561239 COL4A3BPQ9Y5P4 624 aa15.05■□□□□ -0
SHF-210ENST00000561239 CHD9Q3L8U1 2897 aa15.05■□□□□ -0
SHF-210ENST00000561239 TTC3P53804 2025 aa15.04■□□□□ -0
SHF-210ENST00000561239 EPOPA6NHQ4 379 aa15.04■□□□□ -0
SHF-210ENST00000561239 C9IYK1 514 aa15.04■□□□□ -0
SHF-210ENST00000561239 EYA4O95677 639 aa15.04■□□□□ -0
SHF-210ENST00000561239 ARL2P36404 184 aa15.04■□□□□ -0
SHF-210ENST00000561239 NUCB2P80303 420 aa15.04■□□□□ -0
SHF-210ENST00000561239 MXD4Q14582 209 aaPredicted RBP15.04■□□□□ -0
SHF-210ENST00000561239 STK38Q15208 465 aa15.04■□□□□ -0
SHF-210ENST00000561239 AXDND1Q5T1B0 1012 aaPredicted RBP15.04■□□□□ -0
SHF-210ENST00000561239 CABP7Q86V35 215 aa15.04■□□□□ -0
SHF-210ENST00000561239 CRIPAKQ8N1N5 446 aa15.04■□□□□ -0
SHF-210ENST00000561239 MICALL1Q8N3F8 863 aa15.04■□□□□ -0
SHF-210ENST00000561239 CLP1Q92989 425 aaKnown RBP15.04■□□□□ -0
SHF-210ENST00000561239 EPSTI1Q96J88 318 aa15.04■□□□□ -0
SHF-210ENST00000561239 NLRP4Q96MN2 994 aa15.04■□□□□ -0
SHF-210ENST00000561239 CLIC6Q96NY7 704 aa15.04■□□□□ -0
SHF-210ENST00000561239 C11orf84Q9BUA3 381 aaPredicted RBP15.04■□□□□ -0
SHF-210ENST00000561239 PLVAPQ9BX97 442 aa15.04■□□□□ -0
SHF-210ENST00000561239 NT5C3AQ9H0P0 336 aa15.04■□□□□ -0
SHF-210ENST00000561239 RC3H2Q9HBD1 1191 aaKnown RBP15.04■□□□□ -0
SHF-210ENST00000561239 ATP6V0A4Q9HBG4 840 aa15.04■□□□□ -0
SHF-210ENST00000561239 CFAP45Q9UL16 551 aa15.04■□□□□ -0
SHF-210ENST00000561239 A0A087WZ62 844 aa15.03■□□□□ -0
SHF-210ENST00000561239 E9PMD0 336 aa15.03■□□□□ -0
SHF-210ENST00000561239 H3BNC9 293 aa15.03■□□□□ -0
SHF-210ENST00000561239 MGEA5O60502 916 aa15.03■□□□□ -0
SHF-210ENST00000561239 SKIP12755 728 aa15.03■□□□□ -0
SHF-210ENST00000561239 CYP11B2P19099 503 aa15.03■□□□□ -0
SHF-210ENST00000561239 BMPR1AP36894 532 aa15.03■□□□□ -0
SHF-210ENST00000561239 ANP32AP39687 249 aaKnown RBP15.03■□□□□ -0
SHF-210ENST00000561239 UBA7P41226 1012 aa15.03■□□□□ -0
SHF-210ENST00000561239 FAM189BP81408 668 aa15.03■□□□□ -0
SHF-210ENST00000561239 TFDP1Q14186 410 aa15.03■□□□□ -0
SHF-210ENST00000561239 DSC3Q14574 896 aa15.03■□□□□ -0
SHF-210ENST00000561239 PCBP1Q15365 356 aaKnown RBP eCLIP15.03■□□□□ -0
SHF-210ENST00000561239 CCDC85BQ15834 202 aaPredicted RBP15.03■□□□□ -0
SHF-210ENST00000561239 NAALADL2Q58DX5 795 aa15.03■□□□□ -0
SHF-210ENST00000561239 PADI6Q6TGC4 694 aa15.03■□□□□ -0
SHF-210ENST00000561239 SRGAP1Q7Z6B7 1085 aa15.03■□□□□ -0
SHF-210ENST00000561239 KCNG4Q8TDN1 519 aa15.03■□□□□ -0
SHF-210ENST00000561239 GDPD5Q8WTR4 605 aa15.03■□□□□ -0
SHF-210ENST00000561239 RSPH1Q8WYR4 309 aa15.03■□□□□ -0
SHF-210ENST00000561239 CHAMP1Q96JM3 812 aa15.03■□□□□ -0
SHF-210ENST00000561239 FDXACB1Q9BRP7 624 aaPredicted RBP15.03■□□□□ -0
SHF-210ENST00000561239 BHMT2Q9H2M3 363 aa15.03■□□□□ -0
SHF-210ENST00000561239 BLOC1S4Q9NUP1 217 aa15.03■□□□□ -0
SHF-210ENST00000561239 DAXXQ9UER7 740 aaPredicted RBP15.03■□□□□ -0
SHF-210ENST00000561239 CIZ1Q9ULV3 898 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms