RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	LINC00301	Q8NCQ3	95 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	LINC01599	Q8WXQ3	324 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	PNMA5	Q96PV4	448 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	ADAM2	Q99965	735 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	CSRNP2	Q9H175	543 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	RGS18	Q9NS28	235 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	CFAP45	Q9UL16	551 aa		28.6	■■■□□ 2.17
TCF12-222	ENST00000561152	RBAK-RBAKDN	I3L0D1	243 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	UPP2	O95045	317 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	BRD1	O95696	1058 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	STAG3L1	P0CL83	205 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	PCBP1	Q15365	356 aa	Known RBP eCLIP	28.59	■■■□□ 2.17	5e-7	■■■■■ 38.2
TCF12-222	ENST00000561152	TMEM119	Q4V9L6	283 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	RTN4RL1	Q86UN2	441 aa	Predicted RBP	28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	CCSER1	Q9C0I3	900 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	TFIP11	Q9UBB9	837 aa	Known RBP	28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	TTC3	P53804	2025 aa		28.59	■■■□□ 2.17
TCF12-222	ENST00000561152	SPTLC2	O15270	562 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	PPP6R2	O75170	966 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	CA3	P07451	260 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	GLRA2	P23416	452 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	PPP2R2D	Q66LE6	453 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	SLC24A5	Q71RS6	500 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	CATSPER4	Q7RTX7	472 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	NPAS4	Q8IUM7	802 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	ASAP3	Q8TDY4	903 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	KIFAP3	Q92845	792 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	YME1L1	Q96TA2	773 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	PLIN2	Q99541	437 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	ZNF576	Q9H609	170 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	CHST12	Q9NRB3	414 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	DACT1	Q9NYF0	836 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	ATP6V1D	Q9Y5K8	247 aa		28.58	■■■□□ 2.17
TCF12-222	ENST00000561152	MGEA5	O60502	916 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	CSDE1	O75534	798 aa	Known RBP	28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	MYOG	P15173	224 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	SARS	P49591	514 aa	Known RBP	28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	HTRA4	P83105	476 aa	Predicted RBP	28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	CAPS	Q13938	189 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	PPP2R5A	Q15172	486 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	FOXD4L3	Q6VB84	417 aa	Predicted RBP	28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	KCNK18	Q7Z418	384 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	TIPIN	Q9BVW5	301 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	NFKBIZ	Q9BYH8	718 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	SEMA6B	Q9H3T3	888 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	GPRC5C	Q9NQ84	441 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	DAXX	Q9UER7	740 aa	Predicted RBP	28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	CCDC39	Q9UFE4	941 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	LRFN2	Q9ULH4	789 aa		28.57	■■■□□ 2.16
TCF12-222	ENST00000561152	FGFR4	P22455	802 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	PTEN	P60484	403 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	DSC3	Q14574	896 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152		Q7L0L9	218 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	IFNLR1	Q8IU57	520 aa	Predicted RBP	28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	SYT2	Q8N9I0	419 aa	Predicted RBP	28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	KCNG4	Q8TDN1	519 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	CLIC6	Q96NY7	704 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	KCND2	Q9NZV8	630 aa		28.56	■■■□□ 2.16
TCF12-222	ENST00000561152	SSB	P05455	408 aa	Known RBP eCLIP	28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	KARS	Q15046	597 aa	Known RBP	28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	RINT1	Q6NUQ1	792 aa		28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	SYMPK	Q92797	1274 aa	Known RBP	28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	IFT74	Q96LB3	600 aa		28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	TTYH1	Q9H313	450 aa	Predicted RBP	28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	PCDHB7	Q9Y5E2	793 aa		28.55	■■■□□ 2.16
TCF12-222	ENST00000561152	LRRIQ4	A6NIV6	560 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152		C9IYK1	514 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	ERLIN2	O94905	339 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	PLA2G4B	P0C869	781 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	PLCG1	P19174	1290 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	NCBP1	Q09161	790 aa	Known RBP	28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	SPECC1	Q5M775	1068 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	ZBTB8OS	Q8IWT0	167 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	EPSTI1	Q96J88	318 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	DRC1	Q96MC2	740 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	C2orf40	Q9H1Z8	148 aa		28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	PIN4	Q9Y237	131 aa	Known RBP	28.54	■■■□□ 2.16
TCF12-222	ENST00000561152	INO80B-WBP1	J3KQ70	363 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	NAMPT	P43490	491 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	C1orf186	Q6ZWK4	172 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	FAM161B	Q96MY7	647 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	ELAC1	Q9H777	363 aa	Known RBP	28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	MINDY3	Q9H8M7	445 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	AGPAT5	Q9NUQ2	364 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	ZDHHC9	Q9Y397	364 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	SZT2	Q5T011	3432 aa		28.53	■■■□□ 2.16
TCF12-222	ENST00000561152	COL4A6	Q14031	1691 aa		28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	GUCY2C	P25092	1073 aa		28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	SLC12A3	P55017	1021 aa		28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	DNM1	Q05193	864 aa	Known RBP	28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	SP7	Q8TDD2	431 aa	Predicted RBP	28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	RUSC1	Q9BVN2	902 aa		28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	TMEM161A	Q9NX61	479 aa		28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	MTMR10	Q9NXD2	777 aa		28.52	■■■□□ 2.16
TCF12-222	ENST00000561152	LCHN	A4D1U4	455 aa		28.51	■■■□□ 2.15
TCF12-222	ENST00000561152	CUTA	O60888	179 aa		28.51	■■■□□ 2.15
TCF12-222	ENST00000561152	DGKI	O75912	1065 aa		28.51	■■■□□ 2.15
TCF12-222	ENST00000561152	SKI	P12755	728 aa		28.51	■■■□□ 2.15
TCF12-222	ENST00000561152	AXL	P30530	894 aa		28.51	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms