RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 GPRC5CQ9NQ84 441 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 TMEM161AQ9NX61 479 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 LMCD1Q9NZU5 365 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 LRFN2Q9ULH4 789 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 PLAGL2Q9UPG8 496 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 COL4A3BPQ9Y5P4 624 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 XIRP2A4UGR9 3374 aa14.15□□□□□ -0.14
CHRNA3-208ENST00000561128 LINC01565O15544 149 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 GJB2P29033 226 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 TECP42680 631 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 MRPS5P82675 430 aaKnown RBP14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 HYAL1Q12794 435 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 CAPSQ13938 189 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 SAFBQ15424 915 aaKnown RBP eCLIP14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 ZNF410Q86VK4 478 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 CATSPER3Q86XQ3 398 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 SPPL3Q8TCT6 385 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 GCOM2Q9BZD3 368 aaPredicted RBP14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 UBE2ZQ9H832 354 aaPredicted RBP14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 TYW1Q9NV66 732 aaKnown RBP14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 PIN4Q9Y237 131 aaKnown RBP14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 PCDHB7Q9Y5E2 793 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 BRWD1Q9NSI6 2320 aa14.14□□□□□ -0.15
CHRNA3-208ENST00000561128 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 ST18O60284 1047 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 USO1O60763 962 aaKnown RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 SRGAP2CP0DJJ0 459 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 RFC5P40937 340 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 AFF1P51825 1210 aaKnown RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 RBM10P98175 930 aaKnown RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 DLX2Q07687 328 aaPredicted RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 COL19A1Q14993 1142 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 UBXN11Q5T124 520 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 FERMT3Q86UX7 667 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 COLGALT1Q8NBJ5 622 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 HELQQ8TDG4 1101 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 PSPC1Q8WXF1 523 aaKnown RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 SLC7A3Q8WY07 619 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 BSNDQ8WZ55 320 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 MTRQ99707 1265 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 C11orf84Q9BUA3 381 aaPredicted RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 ELAC1Q9H777 363 aaKnown RBP14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 AGPAT5Q9NUQ2 364 aa14.13□□□□□ -0.15
CHRNA3-208ENST00000561128 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 A0A0U1RQF3 1178 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 H3BQ06 376 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 TBX10O75333 385 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 EDN1P05305 212 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 KCNA5P22460 613 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 GLRA2P23416 452 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 HOXA11P31270 313 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 AMHR2Q16671 573 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 TIGD5Q53EQ6 642 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 MAEAQ7L5Y9 396 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 TMEM173Q86WV6 379 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 RNF149Q8NC42 400 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 NEK9Q8TD19 979 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 BCL7CQ8WUZ0 217 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 HLA-CQ95604 372 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 BACH2Q9BYV9 841 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 POLR3FQ9H1D9 316 aaPredicted RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 NSUN3Q9H649 340 aaKnown RBP14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 POLD4Q9HCU8 107 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 ANKEF1Q9NU02 776 aa14.12□□□□□ -0.15
CHRNA3-208ENST00000561128 CUL9Q8IWT3 2517 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 TTLL13PA6NNM8 815 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 B4GALT5O43286 388 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 DKC1O60832 514 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 RB1P06400 928 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 SFPQP23246 707 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 CDC25AP30304 524 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 ARL2P36404 184 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 LTBRP36941 435 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 PHKA2P46019 1235 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 DNM2P50570 870 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 PTGDRQ13258 359 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 ODR4Q5SWX8 454 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 CATSPER4Q7RTX7 472 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 KCNK18Q7Z418 384 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 POF1BQ8WVV4 589 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 KHSRPQ92945 711 aaKnown RBP eCLIP14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 P2RX5Q93086 422 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 CPB2Q96IY4 423 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 EIF2AQ9BY44 585 aaKnown RBP14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 TMEM117Q9H0C3 514 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 CD320Q9NPF0 282 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 USP20Q9Y2K6 914 aa14.11□□□□□ -0.15
CHRNA3-208ENST00000561128 TSPAN1O60635 241 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 FGF18O76093 207 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 GLP2RO95838 553 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 IL9P15248 144 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 ZSCAN20P17040 1043 aaPredicted RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 FXR2P51116 673 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 ERVFC1P60507 584 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 MBTD1Q05BQ5 628 aa14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 GNL2Q13823 731 aaKnown RBP14.1□□□□□ -0.15
CHRNA3-208ENST00000561128 PTPROQ16827 1216 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms