RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ISM1B1AKI9 464 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RNF225M0QZC1 329 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 GPR25O00155 361 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 EYA2O00167 538 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 KRIT1O00522 736 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 MPHOSPH10O00566 681 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 KCNK3O14649 394 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 PSMA7O14818 248 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 AURKAO14965 403 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 AREL1O15033 823 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TMPRSS2O15393 492 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 P4HA2O15460 535 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 SIGLEC6O43699 453 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TBC1D4O60343 1298 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 MSCO60682 206 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 DGKIO75912 1065 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RTN3O95197 1032 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 PRAMEF1O95521 474 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ITGBL1O95965 494 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 CAPNS1P04632 268 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 LPLP06858 475 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TPM2P07951 284 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 HSPA1AP0DMV8 641 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 HSPA1BP0DMV9 641 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 MYL4P12829 197 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 LCP1P13796 627 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 AKR1B1P15121 316 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 SMPD1P17405 629 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ENDOUP21128 410 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 SP100P23497 879 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 EEF1GP26641 437 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 KIF5BP33176 963 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ARL3P36405 182 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CAP2P40123 477 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 KCNJ5P48544 419 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 HSPA7P48741 367 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 MTNR1BP49286 362 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 AARSP49588 968 aaKnown RBP eCLIP2.31□□□□□ -2.04
RTF1-207ENST00000561076 GALK1P51570 392 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 AGFG1P52594 562 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 LGALS4P56470 323 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 JAM2P57087 298 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 HMGN5P82970 282 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 LACTBP83111 547 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 PFKPQ01813 784 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 NEXNQ0ZGT2 675 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 NMIQ13287 307 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 CUL4AQ13619 759 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 DCTN1Q14203 1278 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 WTAPQ15007 396 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 PDCD1Q15116 288 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 DLGAP5Q15398 846 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CNGA2Q16280 664 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 DUOXA2Q1HG44 320 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 MUM1L1Q5H9M0 696 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CCDC158Q5M9N0 1113 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 FBXO47Q5MNV8 452 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 GJC2Q5T442 439 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 SLC30A6Q6NXT4 461 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 FDX2Q6P4F2 183 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 C16orf54Q6UWD8 224 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 GADL1Q6ZQY3 521 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RAPH1Q70E73 1250 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 UBE2Q1Q7Z7E8 422 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CPLX4Q7Z7G2 160 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 GALNT5Q7Z7M9 940 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RSPH3Q86UC2 560 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 LRRTM4Q86VH4 590 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CXorf67Q86X51 503 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 GATAD2AQ86YP4 633 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 PHYKPLQ8IUZ5 450 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 FTSJ3Q8IY81 847 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 SMYD4Q8IYR2 804 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 CEP57L1Q8IYX8 460 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TAGAPQ8N103 731 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 SH2D3CQ8N5H7 860 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TMCO5AQ8N6Q1 288 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 TRIML1Q8N9V2 468 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 C12orf50Q8NA57 414 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 FANCBQ8NB91 859 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 C3orf20Q8ND61 904 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RCBTB1Q8NDN9 531 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 HIPK4Q8NE63 616 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 GIMAP7Q8NHV1 300 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 NPLOC4Q8TAT6 608 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 ZSCAN18Q8TBC5 510 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 TBC1D22AQ8WUA7 517 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 AFG1LQ8WV93 481 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RTF1Q92541 710 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 TTC9Q92623 222 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CENPIQ92674 756 aaPredicted RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 ASIC4Q96FT7 647 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 KLHDC7BQ96G42 594 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 C1orf159Q96HA4 380 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 RSRC1Q96IZ7 334 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 MAML3Q96JK9 1138 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 FAM167AQ96KS9 214 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 FBXL18Q96ME1 805 aa2.31□□□□□ -2.04
RTF1-207ENST00000561076 CCDC43Q96MW1 224 aaKnown RBP2.31□□□□□ -2.04
RTF1-207ENST00000561076 FANCD2OSQ96PS1 177 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms