RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 NAALADL2Q58DX5 795 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 RHPN2Q8IUC4 686 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 C4orf19Q8IY42 314 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 SLFN12Q8IYM2 578 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 COLGALT1Q8NBJ5 622 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 NLRP4Q96MN2 994 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 TMEM117Q9H0C3 514 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 TMEM60Q9H2L4 133 aa17.87■□□□□ 0.45
LMX1B-204ENST00000561065 YWHABP31946 246 aaKnown RBP17.86■□□□□ 0.45
LMX1B-204ENST00000561065 CALCRLQ16602 461 aa17.86■□□□□ 0.45
LMX1B-204ENST00000561065 PTCRAQ6ISU1 281 aaPredicted RBP17.86■□□□□ 0.45
LMX1B-204ENST00000561065 ZNF410Q86VK4 478 aa17.86■□□□□ 0.45
LMX1B-204ENST00000561065 TMEM143Q96AN5 459 aa17.86■□□□□ 0.45
LMX1B-204ENST00000561065 CEP170P1Q96L14 293 aa17.86■□□□□ 0.45
LMX1B-204ENST00000561065 GCOM2Q9BZD3 368 aaPredicted RBP17.86■□□□□ 0.45
LMX1B-204ENST00000561065 IFT122Q9HBG6 1241 aa17.86■□□□□ 0.45
LMX1B-204ENST00000561065 A0A0U1RQF3 1178 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 GRXCR2A6NFK2 248 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 NEMFO60524 1076 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 DKC1O60832 514 aaKnown RBP eCLIP17.85■□□□□ 0.45
LMX1B-204ENST00000561065 ZSCAN20P17040 1043 aaPredicted RBP17.85■□□□□ 0.45
LMX1B-204ENST00000561065 PBX3P40426 434 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 EMC2Q15006 297 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 EP400NLQ6ZTU2 488 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 RNF169Q8NCN4 708 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 MTMR9Q96QG7 549 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 EIF2AK1Q9BQI3 630 aaKnown RBP17.85■□□□□ 0.45
LMX1B-204ENST00000561065 XPNPEP1Q9NQW7 623 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 COL4A3BPQ9Y5P4 624 aa17.85■□□□□ 0.45
LMX1B-204ENST00000561065 POTEMA6NI47 508 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 MEIS3P2A8K0S8 358 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 FGF18O76093 207 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 SLITRK3O94933 977 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 GLP2RO95838 553 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 SFPQP23246 707 aaKnown RBP eCLIP17.84■□□□□ 0.45
LMX1B-204ENST00000561065 DNM2P50570 870 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 POLGP54098 1239 aaPredicted RBP17.84■□□□□ 0.45
LMX1B-204ENST00000561065 CLUL1Q15846 466 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 SPOUT1Q5T280 376 aaKnown RBP17.84■□□□□ 0.45
LMX1B-204ENST00000561065 FAM178BQ8IXR5 827 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 LRRC43Q8N309 656 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 HELQQ8TDG4 1101 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 SLC7A3Q8WY07 619 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 HSD17B14Q9BPX1 270 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 ZSWIM4Q9H7M6 989 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 TTC12Q9H892 705 aaPredicted RBP17.84■□□□□ 0.45
LMX1B-204ENST00000561065 MINDY3Q9H8M7 445 aa17.84■□□□□ 0.45
LMX1B-204ENST00000561065 RNF216Q9NWF9 866 aaPredicted RBP17.84■□□□□ 0.45
LMX1B-204ENST00000561065 PIN4Q9Y237 131 aaKnown RBP17.84■□□□□ 0.45
LMX1B-204ENST00000561065 LAG3P18627 525 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 RFC5P40937 340 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 PHKA2P46019 1235 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 GNL2Q13823 731 aaKnown RBP17.83■□□□□ 0.44
LMX1B-204ENST00000561065 PRPF31Q8WWY3 499 aaKnown RBP17.83■□□□□ 0.44
LMX1B-204ENST00000561065 LPPQ93052 612 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 C8orf76Q96K31 380 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 JPH2Q9BR39 696 aaPredicted RBP17.83■□□□□ 0.44
LMX1B-204ENST00000561065 IGFLR1Q9H665 355 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 PCDHA12Q9UN75 941 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 PPME1Q9Y570 386 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 PCDHB12Q9Y5F1 795 aa17.83■□□□□ 0.44
LMX1B-204ENST00000561065 FSCN2O14926 492 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 HOXA2O43364 376 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 LYPLA2O95372 231 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 TXKP42681 527 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 ERVFC1P60507 584 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 CDC42EP1Q00587 391 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 LAMTOR4Q0VGL1 99 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 TPH2Q8IWU9 490 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 THNSL1Q8IYQ7 743 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 PSPC1Q8WXF1 523 aaKnown RBP17.82■□□□□ 0.44
LMX1B-204ENST00000561065 TRAIPQ9BWF2 469 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 TLR9Q9NR96 1032 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 CHST12Q9NRB3 414 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 AAASQ9NRG9 546 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 AGPAT5Q9NUQ2 364 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 DACT1Q9NYF0 836 aa17.82■□□□□ 0.44
LMX1B-204ENST00000561065 ATP2B1P20020 1258 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 MCM7P33993 719 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 NRIP1P48552 1158 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 RBM10P98175 930 aaKnown RBP17.81■□□□□ 0.44
LMX1B-204ENST00000561065 UBE3AQ05086 875 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 ADAM15Q13444 863 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 LONRF3Q496Y0 759 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 TWF2Q6IBS0 349 aaKnown RBP17.81■□□□□ 0.44
LMX1B-204ENST00000561065 KCNT2Q6UVM3 1135 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 CATSPER4Q7RTX7 472 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 RBM23Q86U06 439 aaKnown RBP17.81■□□□□ 0.44
LMX1B-204ENST00000561065 FERMT3Q86UX7 667 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 VN1R2Q8NFZ6 395 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 MSLNLQ96KJ4 702 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 EPHX3Q9H6B9 360 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 FAM105AQ9NUU6 356 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 CLEC1BQ9P126 229 aa17.81■□□□□ 0.44
LMX1B-204ENST00000561065 A0A087WWV3 80 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 MBTPS2O43462 519 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 NCK2O43639 380 aa17.8■□□□□ 0.44
LMX1B-204ENST00000561065 B4GALT3O60512 393 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms