RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 LLPHQ9BRT6 129 aaKnown RBP12.08□□□□□ -0.48
TPM1-227ENST00000560970 CWH43Q9H720 699 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 TYW1Q9NV66 732 aaKnown RBP12.08□□□□□ -0.48
TPM1-227ENST00000560970 AKT3Q9Y243 479 aa12.08□□□□□ -0.48
TPM1-227ENST00000560970 PER2O15055 1255 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 MAGEB2O15479 319 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 OATP04181 439 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 XBP1P17861 261 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 KRT2P35908 639 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 ERVFC1P60507 584 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 ZXDAP98168 799 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 PLCB3Q01970 1234 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 PRKCEQ02156 737 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 INF2Q27J81 1249 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 KRT25Q7Z3Z0 450 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 ZNF710Q8N1W2 664 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 LINC01465Q8N7H1 131 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 PRSS33Q8NF86 280 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 GJA10Q969M2 543 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 ZNF558Q96NG5 402 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 SCLT1Q96NL6 688 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 PRRX2Q99811 253 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 RNF19AQ9NV58 838 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 GABBR1Q9UBS5 961 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 PCDHA10Q9Y5I2 948 aa12.07□□□□□ -0.48
TPM1-227ENST00000560970 WNT7AO00755 349 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 SLC37A4O43826 429 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 TMOD1P28289 359 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 PTPN5P54829 565 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
TPM1-227ENST00000560970 SIGLEC14Q08ET2 396 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 KCNC3Q14003 757 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 NONOQ15233 471 aaKnown RBP eCLIP12.06□□□□□ -0.48
TPM1-227ENST00000560970 PTPN21Q16825 1174 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 ANKRD54Q6NXT1 300 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 TMEM184AQ6ZMB5 413 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 PIK3AP1Q6ZUJ8 805 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 TRMT1LQ7Z2T5 733 aaKnown RBP12.06□□□□□ -0.48
TPM1-227ENST00000560970 DIS3L2Q8IYB7 885 aaKnown RBP12.06□□□□□ -0.48
TPM1-227ENST00000560970 LRRC71Q8N4P6 559 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 RPGRIP1Q96KN7 1286 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 MBOAT7Q96N66 472 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 CASD1Q96PB1 797 aa12.06□□□□□ -0.48
TPM1-227ENST00000560970 MRPL9Q9BYD2 267 aaKnown RBP12.06□□□□□ -0.48
TPM1-227ENST00000560970 PUF60Q9UHX1 559 aaKnown RBP12.06□□□□□ -0.48
TPM1-227ENST00000560970 CCDC194A0A1B0GVG4 234 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 BTBD18B2RXH4 712 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 MSH4O15457 936 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 GAS7O60861 476 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 ZSCAN20P17040 1043 aaPredicted RBP12.05□□□□□ -0.48
TPM1-227ENST00000560970 EIF4BP23588 611 aaKnown RBP12.05□□□□□ -0.48
TPM1-227ENST00000560970 SFNP31947 248 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 PBX3P40426 434 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 TECP42680 631 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 GPC3P51654 580 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 USP11P51784 963 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 JAK3P52333 1124 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 NLRP11P59045 1033 aaKnown RBP12.05□□□□□ -0.48
TPM1-227ENST00000560970 FAM189BP81408 668 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 SMC1AQ14683 1233 aaKnown RBP12.05□□□□□ -0.48
TPM1-227ENST00000560970 UGCGQ16739 394 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 CLLU1OSQ5K130 101 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 EFCAB12Q6NXP0 572 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 KCNT2Q6UVM3 1135 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 ECHDC2Q86YB7 292 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 FBXL6Q8N531 539 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 CASP10Q92851 521 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 PBXIP1Q96AQ6 731 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 C8orf76Q96K31 380 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 ADAMTS10Q9H324 1103 aa12.05□□□□□ -0.48
TPM1-227ENST00000560970 NGRNQ9NPE2 291 aaKnown RBP12.05□□□□□ -0.48
TPM1-227ENST00000560970 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
TPM1-227ENST00000560970 MYO15AQ9UKN7 3530 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 MYO10Q9HD67 2058 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 CYP3A7-CYP3A51PA0A087WV96 503 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 HIDE1A8MVS5 230 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 CHMP2AO43633 222 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 ZNF862O60290 1169 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 DARSP14868 501 aaKnown RBP12.04□□□□□ -0.48
TPM1-227ENST00000560970 HOXB8P17481 243 aaPredicted RBP12.04□□□□□ -0.48
TPM1-227ENST00000560970 CYP3A7P24462 503 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 MCM2P49736 904 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 KRT17Q04695 432 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 TBC1D8BQ0IIM8 1120 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 LETM2Q2VYF4 491 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 Q4G0T1 1027 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 LRCH2Q5VUJ6 765 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 LLGL2Q6P1M3 1020 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 SYCE2Q6PIF2 218 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 LRRC55Q6ZSA7 311 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 NEK8Q86SG6 692 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 SLC39A11Q8N1S5 342 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 RNF169Q8NCN4 708 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 ETNPPLQ8TBG4 499 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 RSPH1Q8WYR4 309 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 ASIC4Q96FT7 647 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 BRMS1Q9HCU9 246 aa12.04□□□□□ -0.48
TPM1-227ENST00000560970 DISC1Q9NRI5 854 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms