RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 TEX33O43247 280 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 KPNA2P52292 529 aaKnown RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 ITPK1Q13572 414 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 ZNF568Q3ZCX4 644 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 INTS5Q6P9B9 1019 aaKnown RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 KCNV1Q6PIU1 500 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 DAGLBQ8NCG7 672 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 PPP1R16BQ96T49 567 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 DDX56Q9NY93 547 aaKnown RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 KCND2Q9NZV8 630 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 MAD2L2Q9UI95 211 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 NPHP3-ACAD11A0A0J9YXS1 232 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 TARSL2A2RTX5 802 aaKnown RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 ARHGAP42A6NI28 874 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 SRGAP2O75044 1071 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 RHOBTB3O94955 611 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 YWHABP31946 246 aaKnown RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 GCLMP48507 274 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 TAP1Q03518 808 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 TTLL4Q14679 1199 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 DRAP1Q14919 205 aaPredicted RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 SWSAP1Q6NVH7 229 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 ZNF564Q8TBZ8 553 aaPredicted RBP7.43□□□□□ -1.22
AP4E1-203ENST00000560508 NYAP2Q9P242 653 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 ARHGAP23Q9P227 1491 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 LRRD1A4D1F6 860 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 PDXKO00764 312 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 RASGRF2O14827 1237 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 ENTPD3O75355 529 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 KRT3P12035 628 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 CDC42EP5Q6NZY7 148 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 TTC13Q8NBP0 860 aa7.43□□□□□ -1.22
AP4E1-203ENST00000560508 EXOC1LA0A1B0GW35 172 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TTC26A0AVF1 554 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 USP27XA6NNY8 438 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 CASQ2O14958 399 aaPredicted RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 MT-ND3P03897 115 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 PDHBP11177 359 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 IQCB1Q15051 598 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 PHLDB3Q6NSJ2 640 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 C7orf31Q8N865 590 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 MARCH10Q8NA82 808 aaPredicted RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 CCNYQ8ND76 341 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 ACTR5Q9H9F9 607 aaPredicted RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 NOVA2Q9UNW9 492 aaKnown RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 SLIT3O75094 1523 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TRIP13Q15645 432 aaPredicted RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 LDHDQ86WU2 507 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 BEST2Q8NFU1 509 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 ADAM22Q9P0K1 906 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 HPS5Q9UPZ3 1129 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 USH1CQ9Y6N9 552 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 KIAA0391O15091 583 aaKnown RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 WDR46O15213 610 aaKnown RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TTI1O43156 1089 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 ZWINTO95229 277 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 SRGNP10124 158 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 GNA15P30679 374 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 FXR2P51116 673 aaKnown RBP eCLIP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 PDE1BQ01064 536 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 NR1I3Q14994 352 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 PLCB4Q15147 1175 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 MUM1L1Q5H9M0 696 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 CYP4F22Q6NT55 531 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 RSBN1LQ6PCB5 846 aaPredicted RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 THEM5Q8N1Q8 247 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TTC25Q96NG3 672 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 Q9H521 79 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 SLC9A2Q9UBY0 812 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 A0A1W2PQJ5 194 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 ZBED1O96006 694 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 RASA1P20936 1047 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 SAT1P21673 171 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 THOC5Q13769 683 aaKnown RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 CCDC38Q502W7 563 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 DSTYKQ6XUX3 929 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TTC39CQ8N584 583 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 KCTD17Q8N5Z5 321 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TMEM35BQ8NCS4 154 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 LPAR1Q92633 364 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 FAM149B1Q96BN6 582 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TXLNGQ9NUQ3 528 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TUBE1Q9UJT0 475 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 FAM187AA6NFU0 413 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 TXNDC9O14530 226 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 RTN2O75298 545 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 GSTA1P08263 222 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 GSTA2P09210 222 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 ADSSL1Q8N142 457 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 C2orf69Q8N8R5 385 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 PYROXD1Q8WU10 500 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 FAF2Q96CS3 445 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 RRP15Q9Y3B9 282 aaKnown RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 EIF3DO15371 548 aaKnown RBP eCLIP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 LUC7L3O95232 432 aaKnown RBP7.42□□□□□ -1.22
AP4E1-203ENST00000560508 CIITAP33076 1130 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 IFT88Q13099 833 aa7.42□□□□□ -1.22
AP4E1-203ENST00000560508 CC2D1AQ6P1N0 951 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms