RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TERF2Q15554 542 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 ZYXQ15942 572 aaKnown RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 CFAP221Q4G0U5 840 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 NOL9Q5SY16 702 aaKnown RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 ADGRD1Q6QNK2 874 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 INTS8Q75QN2 995 aaKnown RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 NOA1Q8NC60 698 aaKnown RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.59□□□□□ -0.71
RTF1-206ENST00000560447 PNKPQ96T60 521 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 GLIS2Q9BZE0 524 aaPredicted RBP10.59□□□□□ -0.71
RTF1-206ENST00000560447 SIX2Q9NPC8 291 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 MED4Q9NPJ6 270 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 GCNT4Q9P109 453 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 ADAMTS5Q9UNA0 930 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 EXOC7Q9UPT5 735 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 ZHX2Q9Y6X8 837 aa10.59□□□□□ -0.71
RTF1-206ENST00000560447 WDR90Q96KV7 1748 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 KIAA1217Q5T5P2 1943 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 H0YCG3 227 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 NFIBO00712 420 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 SASH3O75995 380 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 SEC31AO94979 1220 aaKnown RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 ALAS1P13196 640 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 TAL1P17542 331 aaPredicted RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 SLC9A1P19634 815 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 CCND2P30279 289 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 NMT1P30419 496 aaKnown RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 CASP4P49662 377 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 NCKAP1LP55160 1127 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 RTP1P59025 263 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 VSNL1P62760 191 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 MRPS9P82933 396 aaKnown RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 BFSP1Q12934 665 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 CLUL1Q15846 466 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 DCAF17Q5H9S7 520 aaPredicted RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 MEI1Q5TIA1 1274 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 CCDC181Q5TID7 509 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 TCERG1LQ5VWI1 586 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 RNF207Q6ZRF8 634 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 SYCE1Q8N0S2 351 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 FAM133AQ8N9E0 248 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 EIF1ADQ8N9N8 165 aaKnown RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 PBKQ96KB5 322 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 CCDC43Q96MW1 224 aaKnown RBP10.58□□□□□ -0.72
RTF1-206ENST00000560447 ARID3AQ99856 593 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 PDCD2LQ9BRP1 358 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 CRACR2AQ9BSW2 395 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 TLR10Q9BXR5 811 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 MLXIPQ9HAP2 919 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 ABCB6Q9NP58 842 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 PXMP2Q9NR77 195 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 PSD3Q9NYI0 1048 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 COL20A1Q9P218 1284 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 HDAC6Q9UBN7 1215 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 NAGPAQ9UK23 515 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 DUSP10Q9Y6W6 482 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 A0A0G2JMZ2 1700 aa10.58□□□□□ -0.72
RTF1-206ENST00000560447 A0A087X0T9 212 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 A0A0U1RQG5 324 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 K7ENM7 598 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 VWA5AO00534 786 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 CLIC2O15247 247 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 HRO43593 1189 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 H2AFZP0C0S5 128 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 RHOXF2BP0C7M4 288 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 FAM228BP0C875 321 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 SOX5P35711 763 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 AARSP49588 968 aaKnown RBP eCLIP10.57□□□□□ -0.72
RTF1-206ENST00000560447 GMPSP49915 693 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 RPS6P62753 249 aaKnown RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 UBXN2AP68543 259 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 PTK2Q05397 1052 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 ITGB3BPQ13352 177 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 NNTQ13423 1086 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 TCEAL1Q15170 157 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 ALKBH5Q6P6C2 394 aaKnown RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 H2AFVQ71UI9 128 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 OTUD6AQ7L8S5 288 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 ZNF571Q7Z3V5 609 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 USP37Q86T82 979 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 VSIG10LQ86VR7 867 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 SYCP3Q8IZU3 236 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 DAW1Q8N136 415 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 ZNF280CQ8ND82 737 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 SPATA4Q8NEY3 305 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 REPS2Q8NFH8 660 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 SPIRE2Q8WWL2 714 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 KIFAP3Q92845 792 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 FAM81BQ96LP2 452 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 TRERF1Q96PN7 1200 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 UIMC1Q96RL1 719 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 RMDN3Q96TC7 470 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 RHOXF2Q9BQY4 288 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 PDGFDQ9GZP0 370 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 RPAP3Q9H6T3 665 aaPredicted RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
RTF1-206ENST00000560447 PICK1Q9NRD5 415 aa10.57□□□□□ -0.72
RTF1-206ENST00000560447 WRAP73Q9P2S5 460 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms