RNA–Protein interactions for RNA: ENST00000560420.1

PSME1-207, Transcript of proteasome activator subunit 1, humanhuman

TSL 2

Gene PSME1, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-207ENST00000560420 RILPL1Q5EBL4 403 aa16.37■□□□□ 0.21
PSME1-207ENST00000560420 ECHDC2Q86YB7 292 aa16.37■□□□□ 0.21
PSME1-207ENST00000560420 MINDY3Q9H8M7 445 aa16.37■□□□□ 0.21
PSME1-207ENST00000560420 CHST12Q9NRB3 414 aa16.37■□□□□ 0.21
PSME1-207ENST00000560420 DBR1Q9UK59 544 aaKnown RBP16.37■□□□□ 0.21
PSME1-207ENST00000560420 SMC3Q9UQE7 1217 aa16.37■□□□□ 0.21
PSME1-207ENST00000560420 RWDD3Q9Y3V2 267 aa16.37■□□□□ 0.21
PSME1-207ENST00000560420 GTPBP6O43824 516 aaPredicted RBP16.36■□□□□ 0.21
PSME1-207ENST00000560420 DGAT1O75907 488 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 GNL2Q13823 731 aaKnown RBP16.36■□□□□ 0.21
PSME1-207ENST00000560420 PDIA5Q14554 519 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 COL19A1Q14993 1142 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 FAM102BQ5T8I3 360 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 POTEGQ6S5H5 508 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 SRGAP1Q7Z6B7 1085 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 PIGOQ8TEQ8 1089 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 NLRP4Q96MN2 994 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 MTRQ99707 1265 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 PLVAPQ9BX97 442 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 BMP2KQ9NSY1 1161 aaPredicted RBP16.36■□□□□ 0.21
PSME1-207ENST00000560420 PCDHB7Q9Y5E2 793 aa16.36■□□□□ 0.21
PSME1-207ENST00000560420 A0A087WWV3 80 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 ASAP2O43150 1006 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 FGFR1P11362 822 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 SFPQP23246 707 aaKnown RBP eCLIP16.35■□□□□ 0.21
PSME1-207ENST00000560420 HOXA11P31270 313 aaPredicted RBP16.35■□□□□ 0.21
PSME1-207ENST00000560420 CTNNB1P35222 781 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 CAMK1Q14012 370 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 CCDC85BQ15834 202 aaPredicted RBP16.35■□□□□ 0.21
PSME1-207ENST00000560420 ASAP3Q8TDY4 903 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 TCP11Q8WWU5 503 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 P2RX5Q93086 422 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 MRPL38Q96DV4 380 aaKnown RBP16.35■□□□□ 0.21
PSME1-207ENST00000560420 CASD1Q96PB1 797 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 MMTAG2Q9BU76 263 aaKnown RBP16.35■□□□□ 0.21
PSME1-207ENST00000560420 NFKBIZQ9BYH8 718 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
PSME1-207ENST00000560420 ATP6V0A4Q9HBG4 840 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 AGPAT5Q9NUQ2 364 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 HCSTQ9UBK5 93 aa16.35■□□□□ 0.21
PSME1-207ENST00000560420 GLRA2P23416 452 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 PTENP60484 403 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 GPM6BQ13491 265 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 CAPSQ13938 189 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 AMHR2Q16671 573 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 CLLU1OSQ5K130 101 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 LRRC55Q6ZSA7 311 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 PPM1EQ8WY54 764 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
PSME1-207ENST00000560420 SCLT1Q96NL6 688 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 NACC1Q96RE7 527 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 TMEM117Q9H0C3 514 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 LMAN2LQ9H0V9 348 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 CWH43Q9H720 699 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
PSME1-207ENST00000560420 THEGQ9P2T0 379 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 BRWD1Q9NSI6 2320 aa16.34■□□□□ 0.21
PSME1-207ENST00000560420 GRM6O15303 877 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 ZNF623O75123 536 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 EOMESO95936 686 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 ZSCAN20P17040 1043 aaPredicted RBP16.33■□□□□ 0.2
PSME1-207ENST00000560420 PHKA2P46019 1235 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 MXD4Q14582 209 aaPredicted RBP16.33■□□□□ 0.2
PSME1-207ENST00000560420 PCBP1Q15365 356 aaKnown RBP eCLIP16.33■□□□□ 0.23e-7■□□□□ 10.4
PSME1-207ENST00000560420 PAN2Q504Q3 1202 aaKnown RBP16.33■□□□□ 0.2
PSME1-207ENST00000560420 NAALADL2Q58DX5 795 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 HYIQ5T013 277 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 UBXN11Q5T124 520 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 LARP1BQ659C4 914 aaKnown RBP16.33■□□□□ 0.2
PSME1-207ENST00000560420 HAUS3Q68CZ6 603 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 RNF149Q8NC42 400 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 ERMNQ8TAM6 284 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 ATXN2LQ8WWM7 1075 aaKnown RBP16.33■□□□□ 0.2
PSME1-207ENST00000560420 SNX21Q969T3 373 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 C11orf84Q9BUA3 381 aaPredicted RBP16.33■□□□□ 0.2
PSME1-207ENST00000560420 DACT1Q9NYF0 836 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 PLAGL2Q9UPG8 496 aa16.33■□□□□ 0.2
PSME1-207ENST00000560420 TBKBP1A7MCY6 615 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 PP2D1A8MPX8 630 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 H3BQV1 296 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 HOXA2O43364 376 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 USO1O60763 962 aaKnown RBP16.32■□□□□ 0.2
PSME1-207ENST00000560420 ITGB1P05556 798 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 MBTD1Q05BQ5 628 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 CDCA2Q69YH5 1023 aaPredicted RBP16.32■□□□□ 0.2
PSME1-207ENST00000560420 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 MICALL1Q8N3F8 863 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 PLXNA4Q9HCM2 1894 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 GPRC5CQ9NQ84 441 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 LRWD1Q9UFC0 647 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 PIN4Q9Y237 131 aaKnown RBP16.32■□□□□ 0.2
PSME1-207ENST00000560420 CUL9Q8IWT3 2517 aa16.32■□□□□ 0.2
PSME1-207ENST00000560420 K7ELQ4 463 aaPredicted RBP16.31■□□□□ 0.2
PSME1-207ENST00000560420 TSPAN1O60635 241 aa16.31■□□□□ 0.2
PSME1-207ENST00000560420 CYP11B2P19099 503 aa16.31■□□□□ 0.2
PSME1-207ENST00000560420 DNAJB1P25685 340 aa16.31■□□□□ 0.2
PSME1-207ENST00000560420 PTPROQ16827 1216 aa16.31■□□□□ 0.2
PSME1-207ENST00000560420 TIGD5Q53EQ6 642 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms