RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 GPM6BQ13491 265 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 CTTNQ14247 550 aaKnown RBP16.47■□□□□ 0.23
IDH3A-219ENST00000560414 RABEP1Q15276 862 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 ODR4Q5SWX8 454 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 FAM184AQ8NB25 1140 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 SCLT1Q96NL6 688 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 LXNQ9BS40 222 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 CYP26B1Q9NR63 512 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 RGS18Q9NS28 235 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 LMCD1Q9NZU5 365 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 LRFN2Q9ULH4 789 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 CUL9Q8IWT3 2517 aa16.47■□□□□ 0.23
IDH3A-219ENST00000560414 COL4A6Q14031 1691 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 C9IYK1 514 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 H3BNC9 293 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 NEMFO60524 1076 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 MAFO75444 373 aaPredicted RBP16.46■□□□□ 0.23
IDH3A-219ENST00000560414 FECHP22830 423 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 TXKP42681 527 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 HMGN5P82970 282 aaKnown RBP16.46■□□□□ 0.23
IDH3A-219ENST00000560414 FBXO18Q8NFZ0 1043 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
IDH3A-219ENST00000560414 NLRP7Q8WX94 980 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 CEP170P1Q96L14 293 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 MTMR9Q96QG7 549 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 TMEM60Q9H2L4 133 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 TTC12Q9H892 705 aaPredicted RBP16.46■□□□□ 0.23
IDH3A-219ENST00000560414 SUCLA2Q9P2R7 463 aaPredicted RBP16.46■□□□□ 0.23
IDH3A-219ENST00000560414 PCDHA12Q9UN75 941 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 PCDHB7Q9Y5E2 793 aa16.46■□□□□ 0.23
IDH3A-219ENST00000560414 MRPL42Q9Y6G3 142 aaKnown RBP16.46■□□□□ 0.23
IDH3A-219ENST00000560414 DKC1O60832 514 aaKnown RBP eCLIP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 SLITRK3O94933 977 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 CD2BP2O95400 341 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 DARSP14868 501 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 MCM7P33993 719 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 BMPR1AP36894 532 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 DNM2P50570 870 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 MRPS5P82675 430 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 DSC3Q14574 896 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 TJAP1Q5JTD0 557 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 FAM102BQ5T8I3 360 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 SLC24A5Q71RS6 500 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 KSR1Q8IVT5 923 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 TPH2Q8IWU9 490 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 CMTR2Q8IYT2 770 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 CLP1Q92989 425 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 EIF2AK1Q9BQI3 630 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
IDH3A-219ENST00000560414 C1orf112Q9NSG2 853 aa16.45■□□□□ 0.22
IDH3A-219ENST00000560414 A0A087WZ62 844 aa16.44■□□□□ 0.22
IDH3A-219ENST00000560414 YWHABP31946 246 aaKnown RBP16.44■□□□□ 0.22
IDH3A-219ENST00000560414 FAM189BP81408 668 aa16.44■□□□□ 0.22
IDH3A-219ENST00000560414 ZNF174Q15697 407 aa16.44■□□□□ 0.22
IDH3A-219ENST00000560414 RHPN2Q8IUC4 686 aa16.44■□□□□ 0.22
IDH3A-219ENST00000560414 MRPL38Q96DV4 380 aaKnown RBP16.44■□□□□ 0.22
IDH3A-219ENST00000560414 FDXACB1Q9BRP7 624 aaPredicted RBP16.44■□□□□ 0.22
IDH3A-219ENST00000560414 FOXP1Q9H334 677 aaPredicted RBP16.44■□□□□ 0.22
IDH3A-219ENST00000560414 ZSWIM4Q9H7M6 989 aa16.44■□□□□ 0.22
IDH3A-219ENST00000560414 NLRC5Q86WI3 1866 aa16.44■□□□□ 0.22
IDH3A-219ENST00000560414 MYO7AQ13402 2215 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 A0A087WWV3 80 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 C5orf67F2Z3F1 127 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 GRM6O15303 877 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 ZSCAN20P17040 1043 aaPredicted RBP16.43■□□□□ 0.22
IDH3A-219ENST00000560414 POLGP54098 1239 aaPredicted RBP16.43■□□□□ 0.22
IDH3A-219ENST00000560414 PTPROQ16827 1216 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 XKR9Q5GH70 373 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 SLC7A3Q8WY07 619 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 TMEM143Q96AN5 459 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 NLRP4Q96MN2 994 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 HSD17B14Q9BPX1 270 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 JPH2Q9BR39 696 aaPredicted RBP16.43■□□□□ 0.22
IDH3A-219ENST00000560414 GCOM2Q9BZD3 368 aaPredicted RBP16.43■□□□□ 0.22
IDH3A-219ENST00000560414 DHX33Q9H6R0 707 aaKnown RBP16.43■□□□□ 0.22
IDH3A-219ENST00000560414 RWDD3Q9Y3V2 267 aa16.43■□□□□ 0.22
IDH3A-219ENST00000560414 POTEMA6NI47 508 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 TBKBP1A7MCY6 615 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 CSPG5O95196 566 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 RB1P06400 928 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 FGFR1P11362 822 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 KCNQ1P51787 676 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 CDC42EP1Q00587 391 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 GNL2Q13823 731 aaKnown RBP16.42■□□□□ 0.22
IDH3A-219ENST00000560414 FAM43BQ6ZT52 329 aaPredicted RBP16.42■□□□□ 0.22
IDH3A-219ENST00000560414 OTUD6AQ7L8S5 288 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 HLA-CQ95604 372 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 TMX3Q96JJ7 454 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 C11orf84Q9BUA3 381 aaPredicted RBP16.42■□□□□ 0.22
IDH3A-219ENST00000560414 ATP6V0A4Q9HBG4 840 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 ALG13Q9NP73 1137 aaKnown RBP16.42■□□□□ 0.22
IDH3A-219ENST00000560414 TMEM161AQ9NX61 479 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 HCSTQ9UBK5 93 aa16.42■□□□□ 0.22
IDH3A-219ENST00000560414 RFC5P40937 340 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 EMC2Q15006 297 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 ZNF410Q86VK4 478 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
IDH3A-219ENST00000560414 PRPF31Q8WWY3 499 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms