RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ATF7P17544 494 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 SFPQP23246 707 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 DNM2P50570 870 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 NONOQ15233 471 aaKnown RBP eCLIP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 KCNT2Q6UVM3 1135 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 KRT25Q7Z3Z0 450 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 ZNF410Q86VK4 478 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 RNF135Q8IUD6 432 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 ETNPPLQ8TBG4 499 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 PHF7Q9BWX1 381 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 INO80BQ9C086 356 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 ENTPD7Q9NQZ7 604 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 CHST12Q9NRB3 414 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 HCSTQ9UBK5 93 aa15.23■□□□□ 0.03
SMAD3-214ENST00000560402 USP15Q9Y4E8 981 aaPredicted RBP15.23■□□□□ 0.03
SMAD3-214ENST00000560402 STK36Q9NRP7 1315 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 IGKV6-21A0A0C4DH24 114 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 LOC730098B7Z3J9 87 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 SKIP12755 728 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 GCFC2P16383 781 aaKnown RBP15.22■□□□□ 0.03
SMAD3-214ENST00000560402 NUCB2P80303 420 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 KRT17Q04695 432 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 CBX2Q14781 532 aaPredicted RBP15.22■□□□□ 0.03
SMAD3-214ENST00000560402 NFKBIBQ15653 356 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 NPY5RQ15761 445 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 MTERF2Q49AM1 385 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 PLPP4Q5VZY2 271 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 TMEM184AQ6ZMB5 413 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 GBP4Q96PP9 640 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 NAP1L4Q99733 375 aaKnown RBP15.22■□□□□ 0.03
SMAD3-214ENST00000560402 TCF25Q9BQ70 676 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 TRAIPQ9BWF2 469 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 DDX25Q9UHL0 483 aaKnown RBP15.22■□□□□ 0.03
SMAD3-214ENST00000560402 MUTYHQ9UIF7 546 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 PPME1Q9Y570 386 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 PCDHGC5Q9Y5F6 944 aa15.22■□□□□ 0.03
SMAD3-214ENST00000560402 TECTAO75443 2155 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 XBP1P17861 261 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 ERVFC1P60507 584 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 PSMC5P62195 406 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 ANKRD1Q15327 319 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 CLLU1OSQ5K130 101 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 ZNF598Q86UK7 904 aaKnown RBP15.21■□□□□ 0.03
SMAD3-214ENST00000560402 EXOC8Q8IYI6 725 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 SUSD6Q92537 303 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 MFSD14AQ96MC6 490 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 SPG21Q9NZD8 308 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 PIEZO1Q92508 2521 aa15.21■□□□□ 0.03
SMAD3-214ENST00000560402 TRIOO75962 3097 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 CCDC194A0A1B0GVG4 234 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 PER2O15055 1255 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 CD2BP2O95400 341 aaKnown RBP15.2■□□□□ 0.02
SMAD3-214ENST00000560402 HOXB8P17481 243 aaPredicted RBP15.2■□□□□ 0.02
SMAD3-214ENST00000560402 RAB27AP51159 221 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 PPP2R5CQ13362 524 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 KCNC3Q14003 757 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 SMC1AQ14683 1233 aaKnown RBP15.2■□□□□ 0.02
SMAD3-214ENST00000560402 BMS1Q14692 1282 aaKnown RBP15.2■□□□□ 0.02
SMAD3-214ENST00000560402 LRRC55Q6ZSA7 311 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 SLC39A11Q8N1S5 342 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 RNF169Q8NCN4 708 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 EDAQ92838 391 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 FAM20AQ96MK3 541 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 CEP89Q96ST8 783 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 PDRG1Q9NUG6 133 aa15.2■□□□□ 0.02
SMAD3-214ENST00000560402 DDX11L8A8MPP1 907 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 TBX3O15119 743 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 GAS2O43903 313 aaKnown RBP15.19■□□□□ 0.02
SMAD3-214ENST00000560402 MAFO75444 373 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-214ENST00000560402 STBD1O95210 358 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 PHKA2P46019 1235 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 DRP2Q13474 957 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 INF2Q27J81 1249 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 PPP4R3AQ6IN85 833 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 ANKRD54Q6NXT1 300 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 HFE2Q6ZVN8 426 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 TMC7Q7Z402 723 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 BMP8AQ7Z5Y6 402 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 NEK8Q86SG6 692 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 VN1R2Q8NFZ6 395 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 HELQQ8TDG4 1101 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 CASP10Q92851 521 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 GJA10Q969M2 543 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 INTS4Q96HW7 963 aaKnown RBP15.19■□□□□ 0.02
SMAD3-214ENST00000560402 ZNF668Q96K58 619 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-214ENST00000560402 ZSCAN31Q96LW9 406 aaPredicted RBP15.19■□□□□ 0.02
SMAD3-214ENST00000560402 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 KCNMB3Q9NPA1 279 aa15.19■□□□□ 0.02
SMAD3-214ENST00000560402 A0A087WZ62 844 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 GOLGA6L22H0YM25 854 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 SLC37A4O43826 429 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 FGFR4P22455 802 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 TECP42680 631 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 QARSP47897 775 aaKnown RBP15.18■□□□□ 0.02
SMAD3-214ENST00000560402 ALDH7A1P49419 539 aaKnown RBP15.18■□□□□ 0.02
SMAD3-214ENST00000560402 STK3Q13188 491 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 LETM2Q2VYF4 491 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 TPRNQ4KMQ1 711 aa15.18■□□□□ 0.02
SMAD3-214ENST00000560402 TWF2Q6IBS0 349 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms